Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0292
(480 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 157 6e-39
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 156 8e-39
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 156 1e-38
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 2e-37
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 5e-37
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 145 1e-35
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 3e-27
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 2e-24
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 1e-23
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 4e-17
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 82 3e-16
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 78 3e-15
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 75 2e-14
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 72 2e-13
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 72 2e-13
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 72 3e-13
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 71 7e-13
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 62 2e-10
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.12
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1) 29 2.6
SB_40686| Best HMM Match : rve (HMM E-Value=0.00016) 29 2.6
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 2.6
SB_44507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_36474| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05) 27 8.0
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 159 bits (385), Expect = 1e-39
Identities = 78/133 (58%), Positives = 86/133 (64%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLADQCTGLQ
Sbjct: 121 RIRKLADQCTGLQ 133
Score = 157 bits (381), Expect = 4e-39
Identities = 77/132 (58%), Positives = 85/132 (64%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P F L+ ++ + ++ VDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 445 IRKLADQCTGLQ 480
IRKLADQCTGLQ
Sbjct: 555 IRKLADQCTGLQ 566
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 159 bits (385), Expect = 1e-39
Identities = 79/135 (58%), Positives = 86/135 (63%)
Frame = +1
Query: 76 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 255
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 256 ASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLV 435
P F L+ ++ + ++ VDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 436 LDRIRKLADQCTGLQ 480
LDRIRKLADQCTGLQ
Sbjct: 183 LDRIRKLADQCTGLQ 197
Score = 157 bits (381), Expect = 4e-39
Identities = 76/133 (57%), Positives = 86/133 (64%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ +DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 442 RIRKLADQCTGLQ 480
RIRKLADQCTGLQ
Sbjct: 706 RIRKLADQCTGLQ 718
Score = 131 bits (317), Expect = 3e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 265 YP 270
P
Sbjct: 574 VP 575
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTV 302
F F +GKHVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 157 bits (380), Expect = 6e-39
Identities = 76/132 (57%), Positives = 85/132 (64%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P F L+ ++ + ++ +DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 445 IRKLADQCTGLQ 480
IRKLADQCTGLQ
Sbjct: 121 IRKLADQCTGLQ 132
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 156 bits (379), Expect = 8e-39
Identities = 76/132 (57%), Positives = 85/132 (64%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P F L+ ++ + ++ +DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 445 IRKLADQCTGLQ 480
IRKLADQCTGLQ
Sbjct: 926 IRKLADQCTGLQ 937
Score = 151 bits (365), Expect = 4e-37
Identities = 71/132 (53%), Positives = 84/132 (63%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGA
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P F L+ ++ + ++ +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 445 IRKLADQCTGLQ 480
+RKLAD CTGLQ
Sbjct: 493 LRKLADGCTGLQ 504
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 156 bits (378), Expect = 1e-38
Identities = 75/133 (56%), Positives = 85/133 (63%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ +DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 442 RIRKLADQCTGLQ 480
R RKLADQCTGLQ
Sbjct: 121 RCRKLADQCTGLQ 133
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 151 bits (367), Expect = 2e-37
Identities = 73/133 (54%), Positives = 84/133 (63%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ +D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 442 RIRKLADQCTGLQ 480
R+RKLAD CTGLQ
Sbjct: 121 RLRKLADGCTGLQ 133
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 150 bits (364), Expect = 5e-37
Identities = 72/132 (54%), Positives = 83/132 (62%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P F L+ ++ + + +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 445 IRKLADQCTGLQ 480
IRKLADQC+GLQ
Sbjct: 540 IRKLADQCSGLQ 551
Score = 123 bits (297), Expect = 7e-29
Identities = 59/118 (50%), Positives = 71/118 (60%)
Frame = +1
Query: 127 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXX 306
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 307 XXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDRIRKLADQCTGLQ 480
F L+ ++ + ++ +++VLDR+RKLADQCTGLQ
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQ 118
Score = 119 bits (287), Expect = 1e-27
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYA GHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 405 TIGKEI 422
T+GK++
Sbjct: 94 TVGKQL 99
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 145 bits (352), Expect = 1e-35
Identities = 74/133 (55%), Positives = 84/133 (63%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P T L+ ++ + ++ VD VLD
Sbjct: 61 HVP----------RAVFVDLEPTVVALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 442 RIRKLADQCTGLQ 480
R+RKLADQC+GLQ
Sbjct: 111 RLRKLADQCSGLQ 123
Score = 80.2 bits (189), Expect = 8e-16
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRAVFVDLEPTVV PEQLITGKEDAANNYA GHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 405 TIGKE 419
TIGK+
Sbjct: 99 TIGKQ 103
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 129 bits (312), Expect = 1e-30
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVR 317
F F GKHVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 118 bits (284), Expect = 3e-27
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYA GHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 405 TIGKE 419
T+GKE
Sbjct: 74 TVGKE 78
Score = 77.4 bits (182), Expect = 6e-15
Identities = 42/98 (42%), Positives = 50/98 (51%)
Frame = +1
Query: 187 MPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLV 366
MP+DKTIGGGDDSFNTFF+ETGA P F LL
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 367 RKXXXXXXXXXXXXLERKSVDLVLDRIRKLADQCTGLQ 480
++ + ++ +DL LDRIRKLADQCTGLQ
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQ 98
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 108 bits (260), Expect = 2e-24
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 255
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETAS 253
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 106 bits (254), Expect = 1e-23
Identities = 46/57 (80%), Positives = 53/57 (92%)
Frame = +3
Query: 252 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
+GK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYA GHYTIGKE+
Sbjct: 969 AGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEM 1025
Score = 34.3 bits (75), Expect = 0.053
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +1
Query: 415 RKSVDLVLDRIRKLADQCTGLQ 480
++ V++V+D+IRK+ DQC+GLQ
Sbjct: 1023 KEMVEVVMDKIRKMTDQCSGLQ 1044
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 84.6 bits (200), Expect = 4e-17
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +3
Query: 300 VVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
+ DEVRTGTYRQLFHPEQLITGKEDAANNYA GHYT+GKE+
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 51
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 415 RKSVDLVLDRIRKLADQCTGLQ 480
++ +DLVLDRIRKLADQCTGLQ
Sbjct: 49 KELIDLVLDRIRKLADQCTGLQ 70
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
EVRTGTYRQLFHPEQLITGKEDAANNYA GHYT+GKE+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 415 RKSVDLVLDRIRKLADQCTGLQ 480
++ +DLVLDRIRKLADQCTGLQ
Sbjct: 37 KELIDLVLDRIRKLADQCTGLQ 58
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 81.8 bits (193), Expect = 3e-16
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
EVRTGTYRQLFHPEQLITGKEDAANNYA GHYT+GKE+
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEL 39
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 78.2 bits (184), Expect = 3e-15
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKE 419
E+RTGTYRQLFHPEQL++GKEDAANNYA GHYT+GKE
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKE 38
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +1
Query: 415 RKSVDLVLDRIRKLADQCTGLQ 480
++ +DL LDRIRKLADQCTGLQ
Sbjct: 37 KEHIDLALDRIRKLADQCTGLQ 58
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 75.4 bits (177), Expect = 2e-14
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 309 EVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKE 419
EVR GTYR LFHP+QLITGKEDAANNYA GHYT+GKE
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKE 38
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 72.1 bits (169), Expect = 2e-13
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 57
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 72.1 bits (169), Expect = 2e-13
Identities = 30/56 (53%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 325
Score = 47.6 bits (108), Expect = 5e-06
Identities = 36/138 (26%), Positives = 49/138 (35%)
Frame = +1
Query: 67 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 246
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 247 TGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSV 426
P F +N + + + V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 427 DLVLDRIRKLADQCTGLQ 480
D VLD +RK A+ C LQ
Sbjct: 327 DSVLDVVRKEAESCDCLQ 344
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 71.7 bits (168), Expect = 3e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/133 (25%), Positives = 47/133 (35%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAESCDCLQ 131
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 70.5 bits (165), Expect = 7e-13
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C +Q
Sbjct: 119 VVRKEAESCDCIQ 131
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A GHY+ G E+
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAEL 68
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 47.6 bits (108), Expect = 5e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 359
GK+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 270 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 389
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +1
Query: 142 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 246
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -3
Query: 217 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 107
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_49595| Best HMM Match : POPLD (HMM E-Value=1.1)
Length = 1141
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 143 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPERQA 262
GS A + +S ARC + P G + +SA P++QA
Sbjct: 956 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 995
>SB_40686| Best HMM Match : rve (HMM E-Value=0.00016)
Length = 1586
Score = 28.7 bits (61), Expect = 2.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 411 QWCSDPGHSCWPH 373
+W S+P + CWPH
Sbjct: 49 RWLSEPSYGCWPH 61
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 143 GSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPERQA 262
GS A + +S ARC + P G + +SA P++QA
Sbjct: 1142 GSLMALAAGASADARCQREEPRGSTSAQPAGTSAEPDKQA 1181
>SB_44507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 27.1 bits (57), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 411 QWCSDPGHSCWP 376
QW S+P + CWP
Sbjct: 334 QWLSEPSYGCWP 345
>SB_36474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1608
Score = 27.1 bits (57), Expect = 8.0
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 411 QWCSDPGHSCWP 376
QW S+P + CWP
Sbjct: 729 QWLSEPSYGCWP 740
>SB_15517| Best HMM Match : zf-CCHC (HMM E-Value=3.4e-05)
Length = 799
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -2
Query: 275 STGYVLAAPVSLKKVLKESSPP-----PMVLSVGIWPSGW 171
+TGY P LK V E SP V+S +WPS W
Sbjct: 755 ATGYDNIPPRFLKPVANEISPSLTRIFNRVISDSVWPSDW 794
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,901,291
Number of Sequences: 59808
Number of extensions: 340462
Number of successful extensions: 1040
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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