Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0292
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 143 7e-35
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 143 7e-35
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 143 7e-35
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 141 3e-34
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 119 1e-27
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 119 1e-27
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 118 2e-27
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 118 2e-27
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 118 2e-27
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 116 7e-27
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 116 7e-27
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 116 7e-27
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 110 4e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 108 2e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 107 4e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 105 2e-23
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 73 8e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 73 8e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 73 1e-13
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 72 3e-13
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 72 3e-13
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 59 1e-09
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 59 1e-09
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 38 0.005
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 38 0.005
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 3.1
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 28 4.0
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 28 4.0
Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical pr... 27 7.0
U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical pr... 27 9.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.3
U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthas... 27 9.3
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 143 bits (346), Expect = 7e-35
Identities = 68/133 (51%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P S F L+ ++ + ++ +DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD CTGLQ
Sbjct: 121 RIRRLADNCTGLQ 133
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 143 bits (346), Expect = 7e-35
Identities = 68/133 (51%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P S F L+ ++ + ++ +DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD CTGLQ
Sbjct: 121 RIRRLADNCTGLQ 133
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 143 bits (346), Expect = 7e-35
Identities = 68/133 (51%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P S F L+ ++ + ++ +DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD CTGLQ
Sbjct: 121 RIRRLADNCTGLQ 133
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 141 bits (341), Expect = 3e-34
Identities = 67/132 (50%), Positives = 82/132 (62%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P S F L+ ++ + ++ +DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 445 IRKLADQCTGLQ 480
IR+LAD CTGLQ
Sbjct: 121 IRRLADNCTGLQ 132
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 119 bits (287), Expect = 1e-27
Identities = 61/133 (45%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F ++ ++ + ++ +D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 113 bits (272), Expect = 6e-26
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F SG++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 119 bits (287), Expect = 1e-27
Identities = 61/133 (45%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F ++ ++ + ++ +D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 113 bits (272), Expect = 6e-26
Identities = 48/66 (72%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F SG++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 118 bits (284), Expect = 2e-27
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F ++ ++ + ++ +D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 112 bits (269), Expect = 1e-25
Identities = 47/66 (71%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 118 bits (284), Expect = 2e-27
Identities = 57/134 (42%), Positives = 76/134 (56%)
Frame = +1
Query: 79 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 258
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 259 STYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVL 438
P + F LL ++ + ++ +D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 439 DRIRKLADQCTGLQ 480
DR+R+L + C GLQ
Sbjct: 125 DRVRRLVENCRGLQ 138
Score = 113 bits (273), Expect = 5e-26
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYA GHY
Sbjct: 54 FNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHY 113
Query: 405 TIGKEI 422
TIGKEI
Sbjct: 114 TIGKEI 119
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 118 bits (284), Expect = 2e-27
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F ++ ++ + ++ +D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 112 bits (269), Expect = 1e-25
Identities = 47/66 (71%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +G++VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 116 bits (280), Expect = 7e-27
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
+ F SGKHVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYA GHY
Sbjct: 49 YNTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHY 108
Query: 405 TIGKEI 422
TIGKE+
Sbjct: 109 TIGKEL 114
Score = 113 bits (273), Expect = 5e-26
Identities = 54/133 (40%), Positives = 73/133 (54%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ +D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 442 RIRKLADQCTGLQ 480
R+R+L ++C LQ
Sbjct: 121 RVRRLTERCQSLQ 133
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (280), Expect = 7e-27
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P + F ++ ++ + ++ +D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 110 bits (264), Expect = 6e-25
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 116 bits (280), Expect = 7e-27
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P + F ++ ++ + ++ +D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 442 RIRKLADQCTGLQ 480
RIR+LAD C+GLQ
Sbjct: 119 RIRRLADNCSGLQ 131
Score = 110 bits (264), Expect = 6e-25
Identities = 46/66 (69%), Positives = 57/66 (86%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +G++VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYA GHY
Sbjct: 47 FTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHY 106
Query: 405 TIGKEI 422
T+GKE+
Sbjct: 107 TVGKEL 112
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 110 bits (265), Expect = 4e-25
Identities = 45/56 (80%), Positives = 54/56 (96%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYA GHYT+GKEI
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEI 111
Score = 100 bits (240), Expect = 5e-22
Identities = 55/133 (41%), Positives = 66/133 (49%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +L ++ + ++ +D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 442 RIRKLADQCTGLQ 480
RIR+LA+ C GLQ
Sbjct: 118 RIRRLANNCEGLQ 130
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 108 bits (259), Expect = 2e-24
Identities = 54/132 (40%), Positives = 70/132 (53%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P S F LL ++ + R+ +D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 445 IRKLADQCTGLQ 480
+++LA+ C GLQ
Sbjct: 128 VKRLAENCNGLQ 139
Score = 105 bits (252), Expect = 2e-23
Identities = 47/63 (74%), Positives = 52/63 (82%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIG 413
F GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YA G YTIG
Sbjct: 58 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 117
Query: 414 KEI 422
+E+
Sbjct: 118 REM 120
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 107 bits (257), Expect = 4e-24
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 228 QHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYT 407
Q F +GKHVPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYA GHYT
Sbjct: 53 QAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYT 112
Query: 408 IGKEI 422
IGKE+
Sbjct: 113 IGKEL 117
Score = 84.6 bits (200), Expect = 3e-17
Identities = 43/132 (32%), Positives = 64/132 (48%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 264
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 265 YPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDR 444
P + F + ++ ++ + ++ +D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 445 IRKLADQCTGLQ 480
IRK + C GLQ
Sbjct: 125 IRKQTENCEGLQ 136
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 105 bits (252), Expect = 2e-23
Identities = 47/63 (74%), Positives = 52/63 (82%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIG 413
F GKHVPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YA G YTIG
Sbjct: 30 FFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIG 89
Query: 414 KEI 422
+E+
Sbjct: 90 REM 92
Score = 64.5 bits (150), Expect = 4e-11
Identities = 34/111 (30%), Positives = 50/111 (45%)
Frame = +1
Query: 148 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAH 327
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 328 TDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLDRIRKLADQCTGLQ 480
S F LL ++ + R+ +D+V+DR+++LA+ C GLQ
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQ 111
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 73.3 bits (172), Expect = 8e-14
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +3
Query: 252 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
+GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 56 NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/133 (27%), Positives = 51/133 (38%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
IRK A+ C LQ
Sbjct: 119 VIRKEAEGCDCLQ 131
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 73.3 bits (172), Expect = 8e-14
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +3
Query: 252 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
+GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 56 NGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 36/133 (27%), Positives = 51/133 (38%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
IRK A+ C LQ
Sbjct: 119 VIRKEAEGCDCLQ 131
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 72.9 bits (171), Expect = 1e-13
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 50.0 bits (114), Expect = 9e-07
Identities = 36/133 (27%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAEGCDCLQ 131
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 252 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/133 (26%), Positives = 51/133 (38%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ LQ
Sbjct: 119 VVRKEAESTDCLQ 131
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/57 (54%), Positives = 40/57 (70%)
Frame = +3
Query: 252 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
S K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/133 (26%), Positives = 51/133 (38%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ LQ
Sbjct: 119 VVRKEAESTDCLQ 131
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 70.5 bits (165), Expect = 6e-13
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 46.8 bits (106), Expect = 8e-06
Identities = 34/133 (25%), Positives = 48/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAESCDCLQ 131
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3
Query: 258 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++ G+Y G EI
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 59.3 bits (137), Expect = 1e-09
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +3
Query: 258 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++ G+Y G EI
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
M+E I+V VGQ G QIG WE EHG+Q DG D
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYAPGHY 404
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQAD-DDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 405 TIGKEI 422
G+E+
Sbjct: 111 CQGQEV 116
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 94 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 186
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYAPGHY 404
F Q D +VPRAV VDLEP V++ +++ + LF+ + + A NN+A G Y
Sbjct: 53 FYQAD-DDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-Y 110
Query: 405 TIGKEI 422
G+E+
Sbjct: 111 CQGQEV 116
Score = 34.7 bits (76), Expect = 0.035
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 94 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 186
++VHVGQ G Q+ A W+ EHGI GQ
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 371 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 276
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 110 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPERQARTP 271
++ +SRS P F W+T + + QT P+G T++ S++ + TP
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 300
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 110 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPERQARTP 271
++ +SRS P F W+T + + QT P+G T++ S++ + TP
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 319
>Z82280-5|CAB05266.1| 294|Caenorhabditis elegans Hypothetical
protein R05A10.5 protein.
Length = 294
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 182 ARCPQTRPSGVETILSTLSSARPER-QART 268
A+CP ++PS +I +++ SA+P R QA T
Sbjct: 167 AQCPCSQPSDATSICTSVPSAQPSRFQALT 196
>U64842-2|AAB37084.1| 462|Caenorhabditis elegans Hypothetical
protein F25B4.6 protein.
Length = 462
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 288 LEPTVVDEVRTGTYRQLFHPEQLITGKE-DAANNYAPGHYTIGKEISRFGFGQNSQ 452
L T V +V G +L+ P+ + + + NN + G YTIG + GF +++
Sbjct: 6 LSYTPVTDVGIGAI-ELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNE 60
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 181 GQMPTDKTIGGGDDSFNTFFSETGAA 258
GQMPTDK + S NT +S+ A
Sbjct: 156 GQMPTDKNVNSVITSDNTTYSDVTTA 181
>U12787-1|AAA92672.1| 458|Caenorhabditis elegans HMG CoA synthase
protein.
Length = 458
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 288 LEPTVVDEVRTGTYRQLFHPEQLITGKE-DAANNYAPGHYTIGKEISRFGFGQNSQ 452
L T V +V G +L+ P+ + + + NN + G YTIG + GF +++
Sbjct: 2 LSYTPVTDVGIGAI-ELYFPQNFVDQNDLEKFNNVSSGKYTIGLGQQQMGFCSDNE 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,513,004
Number of Sequences: 27780
Number of extensions: 244525
Number of successful extensions: 660
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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