Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0292
(480 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 152 1e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 152 1e-37
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 151 2e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 151 2e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 133 7e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 133 7e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 126 6e-30
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 73 1e-13
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 71 3e-13
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 71 4e-13
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 70 7e-13
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 70 9e-13
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 70 9e-13
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 69 1e-12
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 68 4e-12
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 68 4e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 48 4e-06
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 48 4e-06
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 0.70
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 2.8
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 28 3.7
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 28 3.7
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 6.5
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 6.5
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 6.5
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 6.5
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 6.5
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 27 6.5
At3g19180.1 68416.m02435 cell division protein-related weak simi... 27 8.7
At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family pr... 27 8.7
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 27 8.7
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 27 8.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 152 bits (369), Expect = 1e-37
Identities = 71/133 (53%), Positives = 84/133 (63%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 152 bits (369), Expect = 1e-37
Identities = 71/133 (53%), Positives = 84/133 (63%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 151 bits (366), Expect = 2e-37
Identities = 71/133 (53%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 151 bits (366), Expect = 2e-37
Identities = 71/133 (53%), Positives = 83/133 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
RIRKLAD CTGLQ
Sbjct: 121 RIRKLADNCTGLQ 133
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 7e-32
Identities = 63/133 (47%), Positives = 78/133 (58%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
R+RKLAD CTGLQ
Sbjct: 121 RVRKLADNCTGLQ 133
Score = 120 bits (288), Expect = 7e-28
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+A GHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEI 422
T+GKEI
Sbjct: 109 TVGKEI 114
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 7e-32
Identities = 63/133 (47%), Positives = 78/133 (58%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + ++ VDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 442 RIRKLADQCTGLQ 480
R+RKLAD CTGLQ
Sbjct: 121 RVRKLADNCTGLQ 133
Score = 120 bits (288), Expect = 7e-28
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+A GHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEI 422
T+GKEI
Sbjct: 109 TVGKEI 114
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 126 bits (305), Expect = 6e-30
Identities = 60/133 (45%), Positives = 76/133 (57%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F L+ ++ + R+ VD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 442 RIRKLADQCTGLQ 480
R+RKLAD CTGLQ
Sbjct: 121 RLRKLADNCTGLQ 133
Score = 117 bits (282), Expect = 4e-27
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHY 404
F F SG+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+A GHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEI 422
T+G+EI
Sbjct: 109 TVGREI 114
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 72.5 bits (170), Expect = 1e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 49.6 bits (113), Expect = 1e-06
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 3/136 (2%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 252
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 253 AASTYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDL 432
P F +N + + + +D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 433 VLDRIRKLADQCTGLQ 480
VLD +RK A+ C LQ
Sbjct: 116 VLDVVRKEAENCDCLQ 131
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 71.3 bits (167), Expect = 3e-13
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 45.6 bits (103), Expect = 2e-05
Identities = 33/133 (24%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 70.9 bits (166), Expect = 4e-13
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Score = 49.6 bits (113), Expect = 1e-06
Identities = 34/133 (25%), Positives = 51/133 (38%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 120 VVRKEAENCDCLQ 132
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 70.1 bits (164), Expect = 7e-13
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 46.0 bits (104), Expect = 1e-05
Identities = 32/133 (24%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 69.7 bits (163), Expect = 9e-13
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 43.2 bits (97), Expect = 9e-05
Identities = 33/133 (24%), Positives = 48/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ LQ
Sbjct: 119 VVRKEAENSDCLQ 131
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 69.7 bits (163), Expect = 9e-13
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 48.8 bits (111), Expect = 2e-06
Identities = 35/133 (26%), Positives = 49/133 (36%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 69.3 bits (162), Expect = 1e-12
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A GHYT G E+
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 113
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/133 (25%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 120 VVRKEAENCDCLQ 132
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 51.2 bits (117), Expect = 4e-07
Identities = 34/133 (25%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 67.7 bits (158), Expect = 4e-12
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAPGHYTIGKEI 422
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A GHYT G E+
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
Score = 51.2 bits (117), Expect = 4e-07
Identities = 34/133 (25%), Positives = 50/133 (37%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 262 TYPVXXXXXXXXXXXXXXXXAHTDSCFIQNNLLLVRKXXXXXXXXXXXXLERKSVDLVLD 441
P F +N + + + +D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 442 RIRKLADQCTGLQ 480
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 45.2 bits (102), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYAPGHY 404
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYH 109
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 47.6 bits (108), Expect = 4e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYAPGHY 404
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYH 109
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 257 AAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 126
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 305 NNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPM 204
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 344 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 192
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 191 GIWPSGWMPCSR 156
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 344 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 192
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 191 GIWPSGWMPCSR 156
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 246 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 76
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 246 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 76
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 246 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 76
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 246 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 76
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 193 WASGHQAGCRAPGSKAPSRHYRSGLR 116
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 320 SADLINNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPP 207
SA++ N RFK + T AA +++ V+ + +PPP
Sbjct: 764 SAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPP 801
>At3g19180.1 68416.m02435 cell division protein-related weak
similarity to cell division protein Ftn2 [Synechococcus
sp. PCC 7942] GI:16226084
Length = 819
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 65 KKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTR 202
K+L+S SA ++ ESRS S AW S++A P TR
Sbjct: 427 KQLESNSDSAVRNSILGKESRSTSATPSLEAWL-MESVLANFPDTR 471
>At1g50240.1 68414.m05633 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 1021
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 317 ADLINNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPMVLSV 192
A ++ R +D S G L P +KK+L +SSP ++L +
Sbjct: 749 AKMVGRPRLAVDLVSKG--LLDPNRMKKLLNQSSPREVILDI 788
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 317 HWHIQTVVSSRTTYYW*GR 373
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 317 HWHIQTVVSSRTTYYW*GR 373
H+ IQ V+S T+YW GR
Sbjct: 114 HFSIQAVLSKMITWYWSGR 132
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,832,215
Number of Sequences: 28952
Number of extensions: 225098
Number of successful extensions: 708
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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