Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0289
(539 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of act... 41 8e-06
AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity mod... 41 8e-06
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 27 0.14
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 24 0.74
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 5.2
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 6.9
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 6.9
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 21 6.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.2
>AJ888865-1|CAI61930.1| 108|Tribolium castaneum modulator of
activity of ets genes protein.
Length = 108
Score = 40.7 bits (91), Expect = 8e-06
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 322 VPKDPRQWSEAAVTAWLRWAAREFSLEGVAL*QFARAQGKDICAMGREEFVARAP 486
+PKDPRQW+ V W+ ++ L V +F GK +C M F++R P
Sbjct: 32 LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFL-MNGKALCLMSLGMFLSRVP 85
>AJ622939-1|CAF22091.1| 108|Tribolium castaneum ETS activity
modulator protein.
Length = 108
Score = 40.7 bits (91), Expect = 8e-06
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 322 VPKDPRQWSEAAVTAWLRWAAREFSLEGVAL*QFARAQGKDICAMGREEFVARAP 486
+PKDPRQW+ V W+ ++ L V +F GK +C M F++R P
Sbjct: 32 LPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRFL-MNGKALCLMSLGMFLSRVP 85
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 26.6 bits (56), Expect = 0.14
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 423 RASSGQGHLCDGPRGVRGQSARI 491
R S G G++CD P G G + I
Sbjct: 392 RISDGGGYICDCPSGTNGTNCEI 414
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 24.2 bits (50), Expect = 0.74
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 412 GRHPLMRTLEPPSAATPS 359
G+HPL++TL TPS
Sbjct: 2675 GKHPLLKTLNNELRGTPS 2692
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 5.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 140 QEAEEPRAMQKVPSLSDLSDPEAS 211
Q + P Q+ PS++DLS + +
Sbjct: 692 QNEKSPSPQQRSPSVTDLSTKDGT 715
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +1
Query: 328 KDPRQWSEAAVTAWL 372
+DP WS+ + WL
Sbjct: 254 EDPNYWSQGSYDDWL 268
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.0 bits (42), Expect = 6.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +1
Query: 328 KDPRQWSEAAVTAWL 372
+DP WS+ + WL
Sbjct: 261 EDPNYWSQGSYDDWL 275
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1
Query: 209 KPLGQKDRRARVLSALH 159
KP+ +K RRAR+ ++L+
Sbjct: 39 KPIMEKRRRARINNSLN 55
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 338 LGSFGTPRRSCSFSQEAKVAFS 273
LGS R C F K AFS
Sbjct: 144 LGSLFRSSRMCFFKSSKKPAFS 165
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 338 LGSFGTPRRSCSFSQEAKVAFS 273
LGS R C F K AFS
Sbjct: 144 LGSLFRSSRMCFFKSSKKPAFS 165
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 338 LGSFGTPRRSCSFSQEAKVAFS 273
LGS R C F K AFS
Sbjct: 144 LGSLFRSSRMCFFKSSKKPAFS 165
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.6 bits (41), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 338 LGSFGTPRRSCSFSQEAKVAFS 273
LGS R C F K AFS
Sbjct: 144 LGSLFRSSRMCFFKSSKKPAFS 165
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,040
Number of Sequences: 336
Number of extensions: 2531
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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