Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0289
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          27   0.30 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.7  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    24   3.7  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   3.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    24   3.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   6.5  

>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -1

Query: 221 GCLEKPLGQKDRRARVLSALHGAPQLPGAHTLCHRR 114
           GC  K  G    + R +S+LH  P  PGAH     R
Sbjct: 205 GCCRKTCGT-GWKYRSISSLHAPPSHPGAHRAAEPR 239


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 150 SASWGSHFMPSAL-PPPSSHKSSLRLNETCFL 58
           +A + +H +PS+L PP SS  ++  +  T FL
Sbjct: 518 TAHFPTHLLPSSLYPPVSSESTTAPIFHTHFL 549


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 86  LDLCDEGGGNADGIKCEPQEAEEPRAMQKVPSLSDLSDPEASLDIPSQV 232
           + +CD+GG  +DG    P +  +   +   P  S+ S P    D PSQ+
Sbjct: 202 IKVCDDGGVQSDGKATAPVDENKNEII--APGSSEGSIPFIDED-PSQI 247


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +2

Query: 326 QKIQDSGAKQQ*R-RGCAGRLESSH*RVSPFNNSRELRARTSVRWAARSSWPERPHLWET 502
           +K  + GA+   R R    RLE+   ++       E + +  V   AR +W E   L+  
Sbjct: 181 EKSTNQGAEGTARVRELEARLEALEAQLQSMRAREEFQQQIHV-CMARKAWLEYEELFLL 239

Query: 503 YFGTSRD--LTKRC 538
           Y  T +D  L K+C
Sbjct: 240 YSATLKDLKLAKKC 253


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = -1

Query: 200 GQKDRRARVLSALHGAPQLPGAHTLCHRRCHHPRHTS 90
           G +  +AR  S+        G H + H  C HP   S
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEHPASRS 540


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = -1

Query: 509  QSMSPINAGALATNSSRPIAQMSLP*ARANC*RATPSNENSRAAQRSHAVTAASLHCLGS 330
            Q   P      + +SS  +A+  +P       RA    +++   + +  V  + LH   +
Sbjct: 717  QQHQPSALAGCSGSSSGGLARNGVP-GLGPLARAESYEDDTDGGESTTVVVVSDLHSAAA 775

Query: 329  FGTPRRSCSFSQEAKVAFSAS-----AIF-LWCPGSV 237
               PR+S  +S  ++ + ++S     AI  L+C GSV
Sbjct: 776  RTPPRQSIGYSLVSRPSSASSNQSRVAISPLYCEGSV 812


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,669
Number of Sequences: 2352
Number of extensions: 11319
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)