Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0289
(539 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 38 0.005
AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical ... 29 1.6
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 28 4.9
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 4.9
Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical p... 27 8.6
Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 298 EKEQLRLGVPKDPRQWSEAAVTAWLRWAAREFSL--EGVAL*QFARAQGKDICAMGREEF 471
EK L KDP +W V AW+ A+ ++ E + + +FA G+++ M F
Sbjct: 124 EKVDLARFRVKDPNEWLVDDVVAWMLDVAKRHNIPFEEMNMHKFAMLSGQEMLTMSERCF 183
Query: 472 VARAPAFMGDILWN 513
+ R P F G++++N
Sbjct: 184 IERDPVF-GNLIFN 196
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 298 EKEQLRLGVPKDPRQWSEAAVTAWLRWAAREFSL--EGVAL*QFARAQGKDICAMGREEF 471
EK L KDP +W V AW+ A+ ++ E + + +FA G+++ M F
Sbjct: 124 EKVDLARFRVKDPNEWLVDDVVAWMLDVAKRHNIPFEEMNMHKFAMLSGQEMLTMSERCF 183
Query: 472 VARAPAFMGDILWN 513
+ R P F G++++N
Sbjct: 184 IERDPVF-GNLIFN 196
>AF098999-3|AAC68726.2| 445|Caenorhabditis elegans Hypothetical
protein W04C9.3 protein.
Length = 445
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 2 PELEEAAFYEAPTAVAPPPRKHVSFSLRLDLCDEGGGNADGI 127
P L A Y A A++ P + +SFS ++ LCD+G G+
Sbjct: 231 PSLTSA--YMAIEAISFPDQPSISFSCQIKLCDKGSDECRGM 270
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 445 CPCPELARIVKGRHPLMRTLEPPSAATPS 359
CPCP ++KG+H +++ P A+PS
Sbjct: 255 CPCPLELELLKGKH--SKSVRPSPPASPS 281
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 74 TRHASLEEAPRRSEPRKRLPPRVQ 3
TRH S+ P+RS + LPPR Q
Sbjct: 772 TRHPSVAVQPQRSGGARTLPPRAQ 795
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 74 TRHASLEEAPRRSEPRKRLPPRVQ 3
TRH S+ P+RS + LPPR Q
Sbjct: 764 TRHPSVAVQPQRSGGARTLPPRAQ 787
>Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical
protein W05B5.1 protein.
Length = 209
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 132 HFMPSALPPPSSHKSSLRL 76
HF +A PPP++H+S L L
Sbjct: 131 HFTQAATPPPTNHESPLYL 149
>Z46787-15|CAO78702.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 26 YEAPTAVAPPPRKHVSFSLRLDLCDEGGGNADGIKCEPQEAEEPRAMQKVPSLSDLSDPE 205
+ P + PP H + R + GGG + G++ P A PRA S L +
Sbjct: 25 FTPPATLVPPTHHHSRSTNRGGVSGTGGGGSGGLQGAP-GAGGPRASHSSRRTSRLHNNV 83
Query: 206 ASLDIPS 226
++L + S
Sbjct: 84 SALGVLS 90
>Z35596-1|CAO78712.1| 829|Caenorhabditis elegans Hypothetical
protein C30D11.1a protein.
Length = 829
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 26 YEAPTAVAPPPRKHVSFSLRLDLCDEGGGNADGIKCEPQEAEEPRAMQKVPSLSDLSDPE 205
+ P + PP H + R + GGG + G++ P A PRA S L +
Sbjct: 25 FTPPATLVPPTHHHSRSTNRGGVSGTGGGGSGGLQGAP-GAGGPRASHSSRRTSRLHNNV 83
Query: 206 ASLDIPS 226
++L + S
Sbjct: 84 SALGVLS 90
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 259 KMAEALKATFASWEKEQLRLGVPKDPRQWSEAAVTAWLRWA 381
KM EA+ T + EKE + G D W + A +WA
Sbjct: 211 KMLEAIFGTDYASEKENVLEGEVDDMVDWQQRVSLAMFKWA 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,726,617
Number of Sequences: 27780
Number of extensions: 265711
Number of successful extensions: 768
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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