Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0287
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.8  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -3

Query: 393 NVSSQNPNAILTSDIQYILQLLISDQNRNKI 301
           ++ S  P    T  I+  + +++SD N NK+
Sbjct: 122 SLESLKPGNQSTPGIKLSINIILSDPNTNKL 152


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/51 (25%), Positives = 16/51 (31%)
 Frame = -1

Query: 587 GKGGRARAQPGGVGFTSSYPSASKGDQQLKSSCFANEFTTGPE*RPAEKSG 435
           G GG   A         +YP+   G      SC  N +      R  E  G
Sbjct: 120 GMGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASNVRNCELVG 170


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/51 (25%), Positives = 16/51 (31%)
 Frame = -1

Query: 587 GKGGRARAQPGGVGFTSSYPSASKGDQQLKSSCFANEFTTGPE*RPAEKSG 435
           G GG   A         +YP+   G      SC  N +      R  E  G
Sbjct: 121 GMGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASNVRNCELVG 171


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/51 (25%), Positives = 16/51 (31%)
 Frame = -1

Query: 587 GKGGRARAQPGGVGFTSSYPSASKGDQQLKSSCFANEFTTGPE*RPAEKSG 435
           G GG   A         +YP+   G      SC  N +      R  E  G
Sbjct: 121 GMGGTGTAGSQADRDGKNYPAVPYGSGDFHDSCTVNNYQDASNVRNCELVG 171


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 554 GVGFTSSYPSA 522
           G GF S YPSA
Sbjct: 199 GAGFRSPYPSA 209


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 554 GVGFTSSYPSA 522
           G GF S YPSA
Sbjct: 91  GAGFRSPYPSA 101


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 156 NNNTASTTLTNYMRHA 203
           NNN A+T   N+  HA
Sbjct: 311 NNNNAATNNQNHHHHA 326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,645
Number of Sequences: 336
Number of extensions: 3474
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)