Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0287
         (704 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein.     33   1.3  
D16105-1|BAA03679.1|  864|Homo sapiens leukocyte tyrosine kinase...    31   4.0  
BC045607-1|AAH45607.1|  476|Homo sapiens LTK protein protein.          31   4.0  
AF258588-1|AAG23791.1|  257|Homo sapiens PP5656 protein.               31   4.0  
AF217986-1|AAG17229.1|  136|Homo sapiens unknown protein.              30   7.0  

>AB058719-1|BAB47445.1| 1162|Homo sapiens KIAA1816 protein protein.
          Length = 1162

 Score = 32.7 bits (71), Expect = 1.3
 Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 620 TSGPKPFLVSPGKGGR-ARAQPGGVGFTSSYPSASKGDQQL 501
           T+GP    V PG GG  + A P G GF  S P A+   Q L
Sbjct: 728 TTGPMQSSVPPGSGGMVSGASPAGPGFLGSQPQAAIMKQML 768


>D16105-1|BAA03679.1|  864|Homo sapiens leukocyte tyrosine kinase
           protein.
          Length = 864

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 593 SPGKGGRARAQPGGVGFTSSYPSASKG 513
           +PG GGR  A  GG G+TS  PS   G
Sbjct: 261 APGSGGRGGAAGGGGGWTSRAPSPQAG 287


>BC045607-1|AAH45607.1|  476|Homo sapiens LTK protein protein.
          Length = 476

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 593 SPGKGGRARAQPGGVGFTSSYPSASKG 513
           +PG GGR  A  GG G+TS  PS   G
Sbjct: 261 APGSGGRGGAAGGGGGWTSRAPSPQAG 287


>AF258588-1|AAG23791.1|  257|Homo sapiens PP5656 protein.
          Length = 257

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = -2

Query: 622 LLVARSPFLFHQGKVGEQGLSQEGWDLLAATRALPRETNNSRVAASRMNLLPVRNSDPLR 443
           LLV    F  H        +S         T + P  TN++R   + M LLP   S P  
Sbjct: 164 LLVLPEAFTIHLPHAPSLDISASAPAPPIVTASRPSRTNSTRTCPATMGLLPSNTSQPCS 223

Query: 442 SP 437
           SP
Sbjct: 224 SP 225


>AF217986-1|AAG17229.1|  136|Homo sapiens unknown protein.
          Length = 136

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +1

Query: 397 VPPNLNISPLSFSPDFSAGRYSGPVVNSFAKQLLLSCWSP 516
           VPP + I  L     FSA   +GPV  SF + L+  CW+P
Sbjct: 15  VPPQMGIY-LDLCGSFSAE--TGPVSQSFLQMLIGVCWNP 51


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,499,070
Number of Sequences: 237096
Number of extensions: 2110792
Number of successful extensions: 4399
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4399
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)