Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0286
         (662 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    50   5e-05
UniRef50_Q7RRI0 Cluster: CCAAT-box DNA binding protein subunit B...    37   0.38 
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    37   0.50 
UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:...    35   2.0  
UniRef50_Q4P6D7 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q8SV02 Cluster: Putative uncharacterized protein ECU07_...    33   8.1  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +2

Query: 11  FLLLRWVDVLTAHLVLSGYWSP 76
           FLLLRWVD LTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q7RRI0 Cluster: CCAAT-box DNA binding protein subunit B;
           n=5; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
           protein subunit B - Plasmodium yoelii yoelii
          Length = 834

 Score = 37.1 bits (82), Expect = 0.38
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = -1

Query: 572 KYFCGSKYHLDLIYCKTKKFVPFNDIYSRQNVIINMFYFCELTSASDLNTRQRNVTSI*N 393
           KY   SKY+  L+  K   F+ +NDI    N+I N+  F +L   S+LN    N  S+ N
Sbjct: 306 KYNKISKYNFKLLLQKNIPFIKYNDITHFNNIIYNVNTFEDLEIFSNLNKYISNDNSLKN 365

Query: 392 I 390
           I
Sbjct: 366 I 366


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 36.7 bits (81), Expect = 0.50
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = +1

Query: 208 WYLPARTHKRSYHQ 249
           WYLPARTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_O82022 Cluster: ENBP1 protein; n=3; Papilionoideae|Rep:
           ENBP1 protein - Medicago truncatula (Barrel medic)
          Length = 1701

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 298 PQASGN*LGKKVVQTIAGGRTSCESARVGTTTPLISAVK 182
           P+ S N + KK V  +  G T C SA VGTT  ++   K
Sbjct: 314 PKGSKNKIKKKEVDLVTNGETVCGSANVGTTVEILETEK 352


>UniRef50_Q4P6D7 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1648

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 189 AEISGVVVPTRADSQEVLPPAIVWTTFLPN*LPLACGVILVSINV 323
           AEI+   +P+ A  + +LP  I+WT F  + L L C +  + INV
Sbjct: 601 AEIALHSIPSAAAERHLLPGNILWTIFFGSWLSLICYIFSILINV 645


>UniRef50_Q8SV02 Cluster: Putative uncharacterized protein
           ECU07_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
           uncharacterized protein ECU07_0900 - Encephalitozoon
           cuniculi
          Length = 372

 Score = 32.7 bits (71), Expect = 8.1
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +2

Query: 161 SNRNALLLHGRNKRGSGTYPRGL 229
           + RNALL+HG N  G+ TY RGL
Sbjct: 112 TKRNALLVHGFNGSGNSTYMRGL 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,563,854
Number of Sequences: 1657284
Number of extensions: 12751209
Number of successful extensions: 23229
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23229
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)