Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0286
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.10 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   5.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 183 SSNAFRFEGWGSRCNYTETLELISQGGWRI 94
           + N+ ++ G      Y E +EL  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 479 RFAWNKYR*MEQTFLFYNKSNPS 547
           R AW+K+  M+Q F + ++S+ S
Sbjct: 545 RTAWDKFTNMQQQFAYIDESSNS 567


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 177 NAFRFEGWGSRCNYTETLELISQGGW 100
           +A R+ G      Y E +E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 52  GVKWLLESIDIYDVNTPPT 108
           G  W L+S   +DV  P T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 315 INVYEKLTELSLSDVLIRCFSS 380
           ++VY +   +SL ++LIR F S
Sbjct: 177 MDVYYEFLLISLINILIRSFKS 198


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 495 NIVKWNKLFCFTINQIQVIFATTKI 569
           N+ +  K+F   I Q  VI   TKI
Sbjct: 220 NVAESRKIFIECIEQYNVILRYTKI 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,052
Number of Sequences: 336
Number of extensions: 3549
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)