Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0281
(490 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 31 0.51
SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2) 30 0.89
SB_15209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.89
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 30 0.89
SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20) 29 1.6
SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018) 29 2.7
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 28 3.6
SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97) 28 3.6
SB_43197| Best HMM Match : HTH_psq (HMM E-Value=6.9) 28 4.7
SB_41909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078) 28 4.7
SB_22002| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25) 28 4.7
SB_59335| Best HMM Match : rve (HMM E-Value=0.0065) 27 6.3
SB_57876| Best HMM Match : SH3_1 (HMM E-Value=0.15) 27 6.3
SB_57797| Best HMM Match : rve (HMM E-Value=6.9e-21) 27 6.3
SB_55060| Best HMM Match : rve (HMM E-Value=0.0085) 27 6.3
SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21) 27 6.3
SB_46885| Best HMM Match : SH3_1 (HMM E-Value=0.021) 27 6.3
SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10) 27 6.3
SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 6.3
SB_15802| Best HMM Match : rve (HMM E-Value=6.9e-21) 27 6.3
SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21) 27 6.3
SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17) 27 6.3
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 27 6.3
SB_41747| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_27233| Best HMM Match : SH3_1 (HMM E-Value=0.18) 27 6.3
SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21) 27 6.3
SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.3
SB_14016| Best HMM Match : rve (HMM E-Value=0.0027) 27 6.3
SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21) 27 6.3
SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35) 27 6.3
SB_30199| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 8.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 27 8.3
SB_27421| Best HMM Match : Peptidase_M35 (HMM E-Value=7.1) 27 8.3
SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2) 27 8.3
SB_16790| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033) 27 8.3
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 147 PSPPPISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCAPKVSP 302
P+P P++ + K+ A S + +P PP D+T + VP+ P P
Sbjct: 218 PTPAPLAPINIGTKRRAPSVKHVKPRRKRPRPPPPGDWTVIAVPQQGPVQLP 269
>SB_51072| Best HMM Match : Extensin_2 (HMM E-Value=5.2)
Length = 298
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 290 ESLALGGTRTNVKTGFHPRENPVEPRLGRHTVSGAQEPPCTGSPPDQ 430
+S+++ T+ + +HP +PV R + + EPP T S P Q
Sbjct: 231 QSISVPPLTTSSPSQYHPLLHPVHLRTTLYYIRSISEPPSTTSSPSQ 277
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 290 ESLALGGTRTNVKTGFHPRENPVEPRLGRHTVSGAQEPPCTGSPPDQ 430
+S+++ + T+ + +HP +PV + + EPP T S P Q
Sbjct: 91 QSISVPPSTTSSPSQYHPLLHPVHLSNTPYYIQSISEPPLTTSSPSQ 137
>SB_15209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 30.3 bits (65), Expect = 0.89
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 93 HNPVRYPPQPGIRKWIPQR*KKKKDPRAAE 4
H+ YP QPG +P + KKKK RAAE
Sbjct: 25 HSGRFYPQQPGGLTHVPSQQKKKKKNRAAE 54
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 30.3 bits (65), Expect = 0.89
Identities = 25/86 (29%), Positives = 33/86 (38%)
Frame = +3
Query: 156 PPISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCAPKVSP*AVPVLMLRRD 335
P S R +L + T PAE+ PP T P P S P + R
Sbjct: 199 PHRSRRETQLAQPRNPTGPAEKPHQYSRETPPVQPRNPTGPAEKPHRSSRETPPVQPRNP 258
Query: 336 FIPGKIP*NLVSGDTP*AAHRSHLAP 413
P + P +L S +TP R+H P
Sbjct: 259 TCPAEKP-HLSSRETPPVQPRNHTCP 283
>SB_24913| Best HMM Match : RVT_1 (HMM E-Value=1e-20)
Length = 906
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 269 YGTAMRAESLALGGTRTNVKTGFHPRENPVEPRLGRHTVSGAQEPPCTGSPPDQQSSAGR 448
YGT + + G T P+ P +PR T + P + Q A R
Sbjct: 770 YGTRSKGGPEMIPGPETIPGPEMIPKSTPTDPRTRNDTEESPKSTPRNYALNAQIKVADR 829
Query: 449 PRTRD-LIVPTRAER 490
P TR L+ P A R
Sbjct: 830 PMTRQGLMAPKTASR 844
>SB_55679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 290 ESLALGGTRTNVKTGFHPRENPVEPRLGRHTVSGAQEPPCTGSPPDQ 430
+S+++ T+ + +HP +PV R + EPP T P Q
Sbjct: 136 QSISVPSLTTSSPSQYHPLPHPVHLRTTLFYIQSISEPPLTTFSPSQ 182
>SB_34780| Best HMM Match : Pox_A32 (HMM E-Value=0.018)
Length = 625
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 343 PGKSRRTSSRATHRERRTGATLHRFTTGPTVECRAPPHPG 462
P S +ATH RT + L T P P HPG
Sbjct: 434 PNGSVEPDKQATHEPARTPSALAERITSPEPPATRPKHPG 473
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 302 LGGTRTNVKTGFHPRENPVEPRLGRHTVSGAQE-PPCTGSPPDQQSSAGRP 451
+GG G+ P P G + SG PP G PP Q AG P
Sbjct: 19 MGGYPPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGP 69
>SB_473| Best HMM Match : Ribosomal_60s (HMM E-Value=0.97)
Length = 757
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 352 SRRTSSRATHRERRTGATLHRFTTGPTVECRAPPHPGLDSPYE 480
S +A H RT + L T P P HPG +P E
Sbjct: 646 SAEPDKQAAHEPARTPSALAERITSPEPPATRPKHPGRVNPLE 688
>SB_43197| Best HMM Match : HTH_psq (HMM E-Value=6.9)
Length = 204
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 147 PSPPPISDRRLRLKKGARSTCPAERLPTKPH 239
P PPP ++ LKK + + PT+PH
Sbjct: 61 PPPPPKGEKYFVLKKPKEAPAVLRKPPTRPH 91
>SB_41909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 890
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 332 GFHP--RENPV-EPRLGRHTVSGAQEPPCTGSPPDQQSSAGRPRT 457
GF P R +PV P G S PP GSP + +S+G P T
Sbjct: 99 GFGPSDRGSPVPRPSCGSSFFSERDPPPGKGSPGSRPNSSGVPMT 143
>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
Length = 788
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 145 VLHLPQFLTG---DYALKKAREALAPQNDYRLNPI 240
+ +P FL+ DY LKKA++A +D L+PI
Sbjct: 412 IFEIPNFLSDEECDYILKKAKKAGMHSSDIHLDPI 446
>SB_22002| Best HMM Match : zf-C2H2 (HMM E-Value=1.7e-25)
Length = 431
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 394 TGATLHRFTTGPTVECRAPPHPGLDSPY 477
TG +LH F + PT+ PP G SPY
Sbjct: 99 TGPSLHDFGSAPTIS--TPPPSGQASPY 124
>SB_59335| Best HMM Match : rve (HMM E-Value=0.0065)
Length = 1020
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 331 GISSPGKSRRTSSRATHRERRTGATLHRFTTGPTVECRAPPHPG 462
G + P K + + +A H+ RT + L T P P HPG
Sbjct: 539 GSAEPDK--QAAEQAAHKPARTPSALAERITSPEPPATRPKHPG 580
>SB_57876| Best HMM Match : SH3_1 (HMM E-Value=0.15)
Length = 216
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 43 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 84
>SB_57797| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 368
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 195 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 236
>SB_55060| Best HMM Match : rve (HMM E-Value=0.0085)
Length = 277
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 104 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 145
>SB_53148| Best HMM Match : rve (HMM E-Value=4.8e-21)
Length = 1329
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 1156 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 1197
>SB_46885| Best HMM Match : SH3_1 (HMM E-Value=0.021)
Length = 235
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 62 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 103
>SB_44206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 597 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 638
>SB_28997| Best HMM Match : rve (HMM E-Value=2.3e-10)
Length = 1847
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 210 PAERLPTKPHRAP-PHDYTKLTVPRCAP 290
PA+RLP PH P P Y T P P
Sbjct: 1697 PADRLPKHPHHVPTPSAYIAKTDPSTRP 1724
>SB_24272| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1197
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 1024 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 1065
>SB_15802| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 481
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 308 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 349
>SB_47642| Best HMM Match : RVT_1 (HMM E-Value=6.7e-21)
Length = 1336
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 1055 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 1096
>SB_45481| Best HMM Match : rve (HMM E-Value=3.1e-17)
Length = 414
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 241 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 282
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 386 SGAQEPPCTGSPPDQ 430
SGA EP CTGS DQ
Sbjct: 10 SGASEPDCTGSKKDQ 24
>SB_41747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 464 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 505
>SB_27233| Best HMM Match : SH3_1 (HMM E-Value=0.18)
Length = 241
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 69 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 110
>SB_23407| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 327
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 255 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 296
>SB_19556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 403 TLHRFTTGPTVECRAPPHPGLDSPY 477
TLHR P E +A P P SPY
Sbjct: 135 TLHRPPPSPVQEAKASPRPPRHSPY 159
>SB_14016| Best HMM Match : rve (HMM E-Value=0.0027)
Length = 430
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 257 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 298
>SB_12115| Best HMM Match : rve (HMM E-Value=6.9e-21)
Length = 428
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 255 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 296
>SB_10467| Best HMM Match : zf-PARP (HMM E-Value=5.6e-35)
Length = 1311
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 162 ISDRRLRLKKGARSTCPAERLPTKPHRAPPHDYTKLTVPRCA 287
+S +L + + RST P R PH PH K R A
Sbjct: 1138 VSPAQLLMSRRTRSTLPTHRRLLVPHPVDPHRVVKALAHRQA 1179
>SB_30199| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 480
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 465 KSRVRGRPALDCWSGGEPVQGGSCAPLTV--CRPRRGSTG 352
+S+VR ++ W+G EP++G C + + C P G G
Sbjct: 183 RSKVR---SICAWNGCEPIEGKKCLRMELYSCEPIEGKKG 219
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 328 DGISSPGKSRRTSSRATHRERRTGATLHRFTTGPTVECRAPPHPG 462
+G + P K + + +A H RT + L T P P HPG
Sbjct: 749 NGSAEPDK--QAAEQAAHEPARTPSALAERITSPEPPATRPKHPG 791
>SB_27421| Best HMM Match : Peptidase_M35 (HMM E-Value=7.1)
Length = 556
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 210 PAERLPTKPHRAP-PHDYTKLTVPRCAP 290
PA+RLP PH P P Y T P P
Sbjct: 481 PADRLPQHPHHVPTPSAYIANTDPSTRP 508
>SB_25452| Best HMM Match : CTF_NFI (HMM E-Value=1.2)
Length = 1056
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 210 PAERLPTKPHRAP-PHDYTKLTVPRCAP 290
PA+RLP PH P P Y T P P
Sbjct: 387 PADRLPQHPHHVPTPSAYIANTDPSTRP 414
>SB_16790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1902
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 341 PRENPVEPRLGRHTVSGAQEPPCTG 415
P ENP EP+LG GA P G
Sbjct: 1415 PGENPEEPQLGARVDEGAPGPSAFG 1439
>SB_13182| Best HMM Match : Pox_A32 (HMM E-Value=0.033)
Length = 745
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 328 DGISSPGKSRRTSSRATHRERRTGATLHRFTTGPTVECRAPPHPG 462
+G + P K + + +A H RT + L T P P HPG
Sbjct: 401 NGSAEPDK--QAAEQAAHEPARTPSALAERITSPEPPATRPKHPG 443
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,357,735
Number of Sequences: 59808
Number of extensions: 388809
Number of successful extensions: 1324
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1038380485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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