Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0281
(490 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 26 0.60
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 26 0.60
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 25 1.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 24 2.4
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 24 3.2
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 4.2
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 23 4.2
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 5.6
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 7.4
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 23 7.4
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 22 9.8
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 22 9.8
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 26.2 bits (55), Expect = 0.60
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 240 RAPPHDYTKLTVPRCAPKVSP*AVPVLMLRRD 335
RAP HDYT PK + +P+ L D
Sbjct: 383 RAPEHDYTVPGTAHVIPKGTMIQIPIYALHHD 414
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.2 bits (55), Expect = 0.60
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +1
Query: 193 AREALAPQNDYRLNPIELHHTTTRNLRYRDARRKSRLRRYPY*C*DGISSPGKSRRTSSR 372
A +A+ + RL+P E T +LR ARR +R+ C + S P S RTS R
Sbjct: 1029 AAQAMLEEPANRLDP-EAVRCTRNDLR-NVARRTQTVRQREEQCGERPSMPSSSPRTSER 1086
Query: 373 ATHRERR 393
+ R
Sbjct: 1087 RANIRAR 1093
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 25.0 bits (52), Expect = 1.4
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +1
Query: 349 KSRRTSSRATHRERRTGATLHR-FTTGPTVECRAPPHPGLDSPYE 480
K T TH ERRT A R T G E P + LD+ +E
Sbjct: 1278 KYNTTQHHQTHHERRTTADFGRKATDGRQHEYAVPSNCLLDTTHE 1322
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 187 KKAREALAPQNDYRLNPIELHH--TTTRNLRYRDARRKSRLR 306
++ R A+A R P + TTR +R+R RRKS R
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.8 bits (49), Expect = 3.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 331 GISSPGKSRRTSSRATHRERR 393
G+ PG SRR S R H+ +
Sbjct: 39 GVHIPGSSRRHSQRRRHKHHQ 59
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 4.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 354 P*NLVSGDTP*AAHRSHLAPVHHRTNSRVPGAPAPG 461
P + +S +P A HL +HH + P PG
Sbjct: 802 PHSALSSHSPVGAGSHHLHHLHHHAAQQPPPGSHPG 837
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 23.4 bits (48), Expect = 4.2
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 98 TPAPPERKKGRREGPRS 148
TP+PP R GRR RS
Sbjct: 1127 TPSPPPRAVGRRAEVRS 1143
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 23.0 bits (47), Expect = 5.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 490 PLSPRRDYQVPGAGAPG 440
P P+ D VPG G PG
Sbjct: 336 PSGPKGDAGVPGYGRPG 352
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 22.6 bits (46), Expect = 7.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 359 EPRLGRHTVSGAQEPPCTGSPPD 427
E R+ R S P +GSPPD
Sbjct: 114 ERRVQRDATSSGGRPGQSGSPPD 136
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 22.6 bits (46), Expect = 7.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 240 RAPPHDYTKLTVPRCAPKVSP*AVPVLMLRRD 335
R P DYT PK + +PV L RD
Sbjct: 382 RVPMRDYTVPGTKHVIPKDTFIQIPVYALHRD 413
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 22.2 bits (45), Expect = 9.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 86 GLCRTPAPPERKKGR 130
GL RTP+ P RK+ R
Sbjct: 798 GLDRTPSHPSRKEDR 812
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 22.2 bits (45), Expect = 9.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 107 PPERKKGRREGPRS 148
PP R+ RR PRS
Sbjct: 251 PPSRRNPRRRSPRS 264
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,457
Number of Sequences: 2352
Number of extensions: 13281
Number of successful extensions: 39
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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