Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0280
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    28   0.080
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    28   0.080
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    28   0.080
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -3

Query: 253 HLRSSSLQVVNEVVETP*KTRVYVWILS*TFSSEYVCIRFQRYHCRDQKQRHEF 92
           +  +SS+   N +  +   T ++VW+++   S+ Y+C  F ++ C+   Q   F
Sbjct: 111 YANASSVGSRNPIHTSSYMTGIWVWLIN--ISATYICYAFGKFSCKVMIQSVSF 162


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -3

Query: 253 HLRSSSLQVVNEVVETP*KTRVYVWILS*TFSSEYVCIRFQRYHCRDQKQRHEF 92
           +  +SS+   N +  +   T ++VW+++   S+ Y+C  F ++ C+   Q   F
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVWLIN--ISATYICYAFGKFSCKVMIQSVSF 395


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = -3

Query: 253 HLRSSSLQVVNEVVETP*KTRVYVWILS*TFSSEYVCIRFQRYHCRDQKQRHEF 92
           +  +SS+   N +  +   T ++VW+++   S+ Y+C  F ++ C+   Q   F
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVWLIN--ISATYICYAFGKFSCKVMIQSVSF 395


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 133 QRYHCRDQKQRHEFMHSYF 77
           ++   RDQK+R+ F ++YF
Sbjct: 117 EKLKTRDQKERNLFKNAYF 135


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 384 DVSDGHVRCS*RMDVFE 334
           D  D H++C  R DV +
Sbjct: 394 DTGDKHIQCGRRADVLK 410


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 431  GPYSVSWN*WVSRSDL 384
            GPY+   N WVS  D+
Sbjct: 2625 GPYAYLSNQWVSYDDI 2640


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,244
Number of Sequences: 336
Number of extensions: 3247
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)