Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0278
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.2  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.2  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 445 SIRKLGSPKWPF 480
           S+ +LG P+WPF
Sbjct: 72  SVPRLGHPQWPF 83


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 430 DWFHRMEKCFKFRGEYLEK 374
           DW++ +E+ +   GEY +K
Sbjct: 99  DWWNELEEKYDKEGEYRKK 117


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -3

Query: 594 PSTDSPDLSPNDFYTFPKIKNKFREQRFSHLKKLWTPT 481
           P     D+S N  Y F K +++    R  +L ++   T
Sbjct: 4   PKLSQMDISENSTYLFDKHEDRNNTDRDENLARVEVAT 41


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 430 DWFHRMEKCFKFRGEYLEK 374
           +W+  +E  F  +GEY +K
Sbjct: 96  NWWQELEAKFDPKGEYKQK 114


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 376 FLSILREI*NIFPYDG 423
           F +++REI N F +DG
Sbjct: 189 FTALVREIRNAFRHDG 204


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 221  ILFIYFLLHRWGTNSQPI 274
            I F   ++HR+GT SQ I
Sbjct: 1297 IQFFAMMIHRFGTFSQII 1314


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 221  ILFIYFLLHRWGTNSQPI 274
            I F   ++HR+GT SQ I
Sbjct: 1297 IQFFAMMIHRFGTFSQII 1314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,438
Number of Sequences: 336
Number of extensions: 3837
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)