Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0277
(660 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A3LWT8 Cluster: Predicted protein; n=1; Pichia stipitis... 36 1.1
UniRef50_A5PLG3 Cluster: Zgc:165601 protein; n=3; Otophysi|Rep: ... 34 3.5
UniRef50_Q7RD16 Cluster: Putative uncharacterized protein PY0561... 34 3.5
UniRef50_UPI0001555A5A Cluster: PREDICTED: similar to BAZF; n=1;... 33 6.1
UniRef50_Q6LJW2 Cluster: Hypothetical membrane protein; n=4; Vib... 33 6.1
UniRef50_A7QKN2 Cluster: Chromosome chr2 scaffold_113, whole gen... 33 6.1
UniRef50_A5BP12 Cluster: Putative uncharacterized protein; n=1; ... 33 6.1
UniRef50_UPI0000498FB4 Cluster: sodium/sulfate symporter; n=1; E... 33 8.0
UniRef50_Q4DT06 Cluster: Putative uncharacterized protein; n=2; ... 33 8.0
>UniRef50_A3LWT8 Cluster: Predicted protein; n=1; Pichia stipitis|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 1298
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +2
Query: 56 MSPYKYNENINGPMIILQFSGKIKVNIRKSFFSEKSQN*ISLLGLI-SLQNRPSWKEVVV 232
M KY +I +++ S K+ IR S+FS+ + N + L+ ++ S P + +++
Sbjct: 784 MQVIKYKSSIIQLIVVFLQSSLEKIPIRDSYFSKVTSNFLELVSILKSTDIYPEFSKLLA 843
Query: 233 SL*WYLVALFTAPFAMFLYPLRSVREHSTNHKHNTSNRDCNNVSNSPPDKASSLYKCDSC 412
L +ALF + + + E+ H S + N+ N+ P+ L +
Sbjct: 844 KLYSINIALFVSELDLVDINTKEEVEYIVGIDHTLSMK---NIPNTMPNSLFELTEVQKT 900
Query: 413 SSY 421
SY
Sbjct: 901 HSY 903
>UniRef50_A5PLG3 Cluster: Zgc:165601 protein; n=3; Otophysi|Rep:
Zgc:165601 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 264
Score = 33.9 bits (74), Expect = 3.5
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 308 EHSTNHKHNTSNRDCNNVSNSPPDKASSLYKCDSCSS 418
+H NHKHN N++ N S+SPP A S S SS
Sbjct: 47 KHQQNHKHNL-NQNQNKTSSSPPPDAPSSSSSSSSSS 82
>UniRef50_Q7RD16 Cluster: Putative uncharacterized protein PY05610;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05610 - Plasmodium yoelii yoelii
Length = 883
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 281 FLYPLRSVREHSTNHKHNTSNRDCNNVSNSPPDKASSLYK 400
FL+ +R +RE+ T+H + +N+ NN + + PD +S+ K
Sbjct: 661 FLFDMRKIRENQTSHTNKKNNK--NNPTYTSPDSTNSISK 698
>UniRef50_UPI0001555A5A Cluster: PREDICTED: similar to BAZF; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to BAZF
- Ornithorhynchus anatinus
Length = 397
Score = 33.1 bits (72), Expect = 6.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 341 NRDCNNVSNSPPDKASSLYKCDSCSSYRIHLRSILHWHVDIRKYVPLT 484
NR N ++S YKCD+C S R + L WH+ YVP T
Sbjct: 180 NRPANLKTHSRIHSGEKPYKCDTCGS-RFVQNAFLKWHLLSTYYVPGT 226
>UniRef50_Q6LJW2 Cluster: Hypothetical membrane protein; n=4;
Vibrionales|Rep: Hypothetical membrane protein -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 376
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +3
Query: 267 HLLRCFSIHSDRC----ENILQTTNTTPQTEIATMLVIVHQTKLRPCTSVTHVVLTAST* 434
H L +HS C ++ + I LVI+ +RPCT V+L A+
Sbjct: 223 HTLPDDHVHSSDCGCGHQHFADAKVINSASSIKEYLVIILSIGIRPCTGAIMVLLFANMV 282
Query: 435 DLYYIGML 458
D+Y++G++
Sbjct: 283 DMYWLGVV 290
>UniRef50_A7QKN2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 187
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 128 VNIRKSFFSEKSQN*ISLLGLISLQNRPSWKEV 226
+++ KS E++Q SL GL +LQ RP W E+
Sbjct: 94 LDLAKSLPEERNQQRSSLFGLFTLQERPQWLEI 126
>UniRef50_A5BP12 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 172
Score = 33.1 bits (72), Expect = 6.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 128 VNIRKSFFSEKSQN*ISLLGLISLQNRPSWKEV 226
+++ KS E++Q SL GL +LQ RP W E+
Sbjct: 79 LDLAKSLPEERNQQRSSLFGLFTLQERPQWLEI 111
>UniRef50_UPI0000498FB4 Cluster: sodium/sulfate symporter; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: sodium/sulfate
symporter - Entamoeba histolytica HM-1:IMSS
Length = 689
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 154 RKISKLNISFRTNLSSESPVVERGCSISVMVPGGIIYCTFC 276
++I K N F NL E P+ E G + G YC+FC
Sbjct: 210 QQIEKTNSLFNLNLHFEMPLFEIGIVAFPLAIAGYFYCSFC 250
>UniRef50_Q4DT06 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 945
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 190 NLSSESPVVERGCSISVMVPGGIIYCTFCDVSLSTPIGARTFYKPQTQHLK 342
+L + SPV C S+++PGG ++ +F + + F+ P +QH K
Sbjct: 244 HLLNISPVSSEACGRSLVLPGGSVFSSFSVQTSPIRESSSLFFGPSSQHEK 294
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,014,633
Number of Sequences: 1657284
Number of extensions: 11884961
Number of successful extensions: 30414
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30365
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -