Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0275
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.3  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   7.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   7.6  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 467 QRACGFCPKPNLRFPFQWCSDHGHSCW 387
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 392 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 481
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 190 ARCPQTRPSGVETILSTLSSASRSW 264
           ++C Q +  G  TI+  L    R W
Sbjct: 74  SKCSQRQKDGSRTIIRYLIKNKRDW 98


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 190 ARCPQTRPSGVETILSTLSSASRSW 264
           ++C Q +  G  TI+  L    R W
Sbjct: 74  SKCSQRQQDGSRTIIRYLIKNKRDW 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,169
Number of Sequences: 336
Number of extensions: 3848
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)