Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0275
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.72 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.7  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 501 STPRWRYRLWVHFLIDGASLR*LREEV*TGVRHLPRASGFHWRRRAL 641
           S P WR++ W  F   G  +  L   V  G   L  +    W RRAL
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFAVVLAGATCLGSSIKAMWLRRAL 595


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -3

Query: 153 PSRHYRSGLR 124
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 216 RWSCLWASGHQAGCRAPGSKAPSRHYR 136
           RW C W+ G    C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 245 LQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 346
           L+   A  H+    + D+EPTV         RQL
Sbjct: 234 LEERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 298 KIDEDSTGYVLASSGSLKKVLKESSPPPMVLSVG 197
           K+ ED+    L++ GS+ K+   +    ++L++G
Sbjct: 241 KLTEDTQERRLSNKGSISKLQFHNKDDDLILTLG 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,790
Number of Sequences: 438
Number of extensions: 4389
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)