Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0275
(722 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 173 1e-43
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 173 1e-43
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 173 1e-43
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 173 1e-43
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 172 2e-43
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 172 2e-43
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 160 7e-40
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 105 4e-23
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 103 1e-22
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 103 1e-22
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 102 3e-22
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 102 3e-22
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 101 4e-22
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 99 1e-21
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 99 1e-21
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 98 4e-21
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 65 5e-11
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 64 7e-11
At3g10650.1 68416.m01281 expressed protein 29 2.4
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 28 7.2
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.5
At3g26900.1 68416.m03366 shikimate kinase family protein similar... 27 9.5
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.5
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 173 bits (420), Expect = 1e-43
Identities = 78/92 (84%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 140
Score = 122 bits (293), Expect = 3e-28
Identities = 48/55 (87%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSE
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSE 55
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F +YP+PQVST VVEPYN +L+TH+ LEH+D + + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 173 bits (420), Expect = 1e-43
Identities = 78/92 (84%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 140
Score = 122 bits (293), Expect = 3e-28
Identities = 48/55 (87%), Positives = 54/55 (98%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSE
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSE 55
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F +YP+PQVST VVEPYN +L+TH+ LEH+D + + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 173 bits (420), Expect = 1e-43
Identities = 78/92 (84%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 140
Score = 123 bits (296), Expect = 1e-28
Identities = 48/55 (87%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSE
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSE 55
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F +YP+PQVST VVEPYN +L+TH+ LEH+D + + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 173 bits (420), Expect = 1e-43
Identities = 78/92 (84%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
TIGKEIVDL LDRIRKLAD CTGLQGFL+F++
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGFLVFNA 140
Score = 123 bits (296), Expect = 1e-28
Identities = 48/55 (87%), Positives = 55/55 (100%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSE
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSE 55
Score = 89.8 bits (213), Expect = 2e-18
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F +YP+PQVST VVEPYN +L+TH+ LEH+D + + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYD 211
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 172 bits (418), Expect = 2e-43
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNA 140
Score = 104 bits (250), Expect = 5e-23
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSE
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F IYP+PQVST VVEPYN +L+TH+ LEH+D A + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYD 211
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 172 bits (418), Expect = 2e-43
Identities = 76/92 (82%), Positives = 84/92 (91%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F GAGKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
T+GKEIVDL LDR+RKLAD CTGLQGFL+F++
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGFLVFNA 140
Score = 104 bits (250), Expect = 5e-23
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSE
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSE 55
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VDYGKKSKL F IYP+PQVST VVEPYN +L+TH+ LEH+D A + DNEA+YD
Sbjct: 154 LERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYD 211
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 160 bits (389), Expect = 7e-40
Identities = 69/92 (75%), Positives = 82/92 (89%)
Frame = +2
Query: 233 FQHFLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 412
F F +G+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 413 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
T+G+EIVD L+R+RKLAD CTGLQGFL+F++
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFNA 140
Score = 105 bits (251), Expect = 4e-23
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPELAS 269
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSE
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 270 TYP 278
P
Sbjct: 61 HVP 63
Score = 87.8 bits (208), Expect = 6e-18
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = +1
Query: 547 MERLFVDYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+ERL VD+GKKSKL F IYP+PQVST VVEPYN +L+TH+ LEH+D + DNEA+YD
Sbjct: 154 LERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYD 211
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 105 bits (251), Expect = 4e-23
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDAVLDVVRKEAENCDCLQGFQVCHS 138
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 194
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 103 bits (247), Expect = 1e-22
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + + F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 215
MRE + + GQ G QIG+ WE+ LEHGI G+ D +
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL 42
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 103 bits (247), Expect = 1e-22
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 51 YYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 110
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 111 AELIDAVLDVVRKEAENCDCLQGFQVCHS 139
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 206
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 102 bits (244), Expect = 3e-22
Identities = 44/89 (49%), Positives = 60/89 (67%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 194
MRE + + GQ G QIG WE+ C EHGI G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGR 35
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 102 bits (244), Expect = 3e-22
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + + F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNE 53
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 101 bits (243), Expect = 4e-22
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 51 YYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 110
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 111 AELIDAVLDVVRKEAENCDCLQGFQVCHS 139
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 210
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 254
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNE 54
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 99 bits (238), Expect = 1e-21
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPELAS 269
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 270 TYP 278
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 99 bits (238), Expect = 1e-21
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ C LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENCDCLQGFQVCHS 138
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + L F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPELAS 269
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 270 TYP 278
P
Sbjct: 59 FVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG 421
+ A GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G
Sbjct: 50 YFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEG 109
Query: 422 KEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
E++D VLD +RK A+ LQGF + HS
Sbjct: 110 AELIDSVLDVVRKEAENSDCLQGFQVCHS 138
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1
Query: 565 DYGKKSKLEFGIYPAPQVSTGVVEPYNFILTTHTTLEHSDWAFMGDNEALYD 720
+Y + + F ++P+P+VS VVEPYN L+ H +E++D + DNEALYD
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYD 209
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 90 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 215
MRE + + GQ G QIG WE+ C EHGI GQ D +
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL 42
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 415
F +A ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 51 FFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 416 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
GK + + ++D I + AD L+GF++ HS
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3
Query: 93 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPE 260
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQAD 56
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.5 bits (150), Expect = 7e-11
Identities = 31/91 (34%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = +2
Query: 242 FLQRAGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 415
F +A ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 51 FFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 416 IGKEIVDLVLDRIRKLADQCTGLQGFLIFHS 508
GK + + ++D I + AD L+GF++ HS
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGFVLCHS 140
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3
Query: 93 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPE 260
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQAD 56
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +1
Query: 52 NSTFKHRKKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSL---MARCPQTRPSGV 222
+S F +R K + SL T KP + + G T S S MAR P +RP
Sbjct: 260 DSVFLNRTPFPQKSPTMSLVT--KPSGQRPLENGFVTPRSRGRSAVYSMARTPYSRPQSS 317
Query: 223 ETILSTLSSASRSWQARTP 279
I S ++ W+ P
Sbjct: 318 VKIGSLFQASPSKWEESLP 336
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 70 RKKLKSKCVSASL---YTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILST 240
++++K+ CV+ L T+ P+ + P AW S+ P +ETI
Sbjct: 101 KERMKTGCVALVLCLNITVDPPDVIKISPCARIEAWIDPFSMAP------PKALETIGKN 154
Query: 241 LSSASRSWQAR 273
LS+ WQ R
Sbjct: 155 LSTQYERWQPR 165
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 458 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 369
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g26900.1 68416.m03366 shikimate kinase family protein similar to
shikimate kinase precursor GB:CAA45121 [Lycopersicon
esculentum]; contains Pfam shikimate kinase domain
PF01202
Length = 280
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +3
Query: 156 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSEPELAST 272
L L HGI +P D T G DDSF++ S PEL T
Sbjct: 177 LALLRHGISIWIDVPLDITAKGDDDSFHSEPS-PELFDT 214
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 9.5
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 458 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 369
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,169,206
Number of Sequences: 28952
Number of extensions: 342547
Number of successful extensions: 1036
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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