Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0274
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   7.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.5  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 672 CDHYTAIINVTFMCT 628
           CD YTAI  + ++CT
Sbjct: 14  CDVYTAIHPLFYVCT 28


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 672 CDHYTAIINVTFMCT 628
           CD YTAI  + ++CT
Sbjct: 14  CDVYTAIHPLFYVCT 28


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 458 SYIYLGNYPNYTL 420
           +Y +LG YPN TL
Sbjct: 57  NYAFLGVYPNGTL 69


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 41  TSTT*MRHTP*DIVLRSQYSHNGCPTLQTETHYCFTAEI 157
           TS     H   DIV   Q  HN    L  E + CF  +I
Sbjct: 196 TSLIHSTHLNGDIVKEHQNLHNKICNLIDEFNECFGLQI 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,869
Number of Sequences: 336
Number of extensions: 2949
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)