BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0274
(691 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein. 106 2e-23
AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-P... 106 2e-23
AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protei... 49 7e-06
AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-P... 49 7e-06
BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p pro... 35 0.12
AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p pro... 35 0.12
AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,... 35 0.12
AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,... 35 0.12
BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p pro... 29 4.5
AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA... 29 4.5
>AF310159-1|AAG41424.1| 3479|Drosophila melanogaster fry protein.
Length = 3479
Score = 106 bits (255), Expect = 2e-23
Identities = 61/142 (42%), Positives = 75/142 (52%)
Frame = -2
Query: 690 STRKYRCDHYTAIINVTFMCTGCPRSPGYTKAPXXXXXXXXXXXXXSVGPLPTDEDNGLG 511
S ++Y CDHYT++I VT + TGCPR + A VG L +D D
Sbjct: 1567 SAKEYPCDHYTSVITVTLLMTGCPRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKE-D 1625
Query: 510 EGRGTLDALLCTTYCXXXXXXXXXXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXX 331
+ GTLD LL + YC L PELTM +FSEIT RFQ+AR +VR
Sbjct: 1626 DKVGTLDVLLSSAYCRSQRFLSKQLAQLRPELTMSIFSEITHRFQSAREDVRALLLQCLL 1685
Query: 330 XXLVNIELVDPNVPPANPLSYI 265
L N+ELV +VPPA PLSYI
Sbjct: 1686 PWLQNMELVATSVPPATPLSYI 1707
>AE014296-1700|AAF50228.2| 3479|Drosophila melanogaster CG32045-PB,
isoform B protein.
Length = 3479
Score = 106 bits (255), Expect = 2e-23
Identities = 61/142 (42%), Positives = 75/142 (52%)
Frame = -2
Query: 690 STRKYRCDHYTAIINVTFMCTGCPRSPGYTKAPXXXXXXXXXXXXXSVGPLPTDEDNGLG 511
S ++Y CDHYT++I VT + TGCPR + A VG L +D D
Sbjct: 1567 SAKEYPCDHYTSVITVTLLMTGCPRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKE-D 1625
Query: 510 EGRGTLDALLCTTYCXXXXXXXXXXXXLHPELTMPMFSEITARFQTARTEVRQXXXXXXX 331
+ GTLD LL + YC L PELTM +FSEIT RFQ+AR +VR
Sbjct: 1626 DKVGTLDVLLSSAYCRSQRFLSKQLAQLRPELTMSIFSEITHRFQSAREDVRALLLQCLL 1685
Query: 330 XXLVNIELVDPNVPPANPLSYI 265
L N+ELV +VPPA PLSYI
Sbjct: 1686 PWLQNMELVATSVPPATPLSYI 1707
>AF351187-1|AAK37558.1| 1629|Drosophila melanogaster furry protein
short isoform protein.
Length = 1629
Score = 48.8 bits (111), Expect = 7e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -2
Query: 690 STRKYRCDHYTAIINVTFMCTGCPRSPGYTKAPXXXXXXXXXXXXXSVGPLPTDEDNGL 514
S ++Y CDHYT++I VT + TGCPR + A VG L +D D G+
Sbjct: 1567 SAKEYPCDHYTSVITVTLLMTGCPRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKGM 1625
>AE014296-1705|ABI31247.1| 1629|Drosophila melanogaster CG32045-PD,
isoform D protein.
Length = 1629
Score = 48.8 bits (111), Expect = 7e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -2
Query: 690 STRKYRCDHYTAIINVTFMCTGCPRSPGYTKAPXXXXXXXXXXXXXSVGPLPTDEDNGL 514
S ++Y CDHYT++I VT + TGCPR + A VG L +D D G+
Sbjct: 1567 SAKEYPCDHYTSVITVTLLMTGCPRVEVHATALQLLQILDKRFFGSVVGTLHSDSDKGM 1625
>BT011404-1|AAR96196.1| 336|Drosophila melanogaster AT24323p
protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 519 RCLRQSAADQRNPKNRLSRSCSSCKALSCTR--GFGGS 626
R L+QS R +N + CS C+ L C R G+GGS
Sbjct: 17 RILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGS 54
>AY122133-1|AAM52645.1| 393|Drosophila melanogaster GH25655p
protein.
Length = 393
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 519 RCLRQSAADQRNPKNRLSRSCSSCKALSCTR--GFGGS 626
R L+QS R +N + CS C+ L C R G+GGS
Sbjct: 74 RILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGS 111
>AE013599-892|AAM71075.1| 336|Drosophila melanogaster CG1827-PB,
isoform B protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 519 RCLRQSAADQRNPKNRLSRSCSSCKALSCTR--GFGGS 626
R L+QS R +N + CS C+ L C R G+GGS
Sbjct: 17 RILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGS 54
>AE013599-891|AAF58918.3| 393|Drosophila melanogaster CG1827-PA,
isoform A protein.
Length = 393
Score = 34.7 bits (76), Expect = 0.12
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 519 RCLRQSAADQRNPKNRLSRSCSSCKALSCTR--GFGGS 626
R L+QS R +N + CS C+ L C R G+GGS
Sbjct: 74 RILKQSKGGLRQTRNAVVEGCSKCEKLQCDRTVGYGGS 111
>BT003581-1|AAO39585.1| 946|Drosophila melanogaster LD17329p
protein.
Length = 946
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 671 AITILLLST*PSCALAAPE-APGTRKRLAAAAAPRQTILRVPLVRCRLTKTTGSERVEEH 495
A+ + + T P AL++P AP R+ +AAA+P+++I ++P V + + +EH
Sbjct: 378 AVAMKSVPTSPVTALSSPPIAPSPRR--SAAASPQKSIAQLPRVEENMDAIMTDDESDEH 435
>AE014297-767|AAF54252.3| 1399|Drosophila melanogaster CG31258-PA
protein.
Length = 1399
Score = 29.5 bits (63), Expect = 4.5
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -3
Query: 671 AITILLLST*PSCALAAPE-APGTRKRLAAAAAPRQTILRVPLVRCRLTKTTGSERVEEH 495
A+ + + T P AL++P AP R+ +AAA+P+++I ++P V + + +EH
Sbjct: 378 AVAMKSVPTSPVTALSSPPIAPSPRR--SAAASPQKSIAQLPRVEENMDAIMTDDESDEH 435
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,309,135
Number of Sequences: 53049
Number of extensions: 593288
Number of successful extensions: 1972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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