Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0271
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z508 Cluster: Putative uncharacterized protein; n=6; ...    35   2.2  
UniRef50_A7TIN5 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q6MEU0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.7  
UniRef50_O80953 Cluster: Putative uncharacterized protein At2g39...    33   8.7  

>UniRef50_Q4Z508 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 466

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +3

Query: 51  KIQ*YMYNVPIF*I*KDLNFLHYNTKHFKQNKT-LWDYECFIRVMNLINERNY-LVLF 218
           K+  Y+ + P+     D N    NTKH K N   L+D   F  + NL+N RNY +V+F
Sbjct: 13  KLLSYLVSKPVKISSFDFNDTLVNTKHGKHNNNILFDRNVFKALFNLLNTRNYQIVIF 70


>UniRef50_A7TIN5 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 723

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
 Frame = -2

Query: 212 YKVISFIY*IHNSDKTFIIPKRLVLFKVFCIIM---QEI*ILLYLKNRYIVHVLLNFHLL 42
           YK+I++I+ + NS+++ I+  + +   + C+ M   QE+  + Y+K + ++ V +  + L
Sbjct: 202 YKLINYIHSLKNSEESLILKNKFLTIILLCLYMSFQQELFHIQYIKYKTLLEVKIILNSL 261

Query: 41  H 39
           H
Sbjct: 262 H 262


>UniRef50_Q6MEU0 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Protochlamydia amoebophila UWE25|Rep:
           Putative uncharacterized protein - Protochlamydia
           amoebophila (strain UWE25)
          Length = 454

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 14/48 (29%), Positives = 30/48 (62%)
 Frame = -2

Query: 161 IIPKRLVLFKVFCIIMQEI*ILLYLKNRYIVHVLLNFHLLHSKILFSV 18
           ++ KRL + +++ +I+    IL +  NR+++   L +H L +KI ++V
Sbjct: 63  LLDKRLYMIEIWVLILTLFGILSFASNRFLIS--LGYHFLDAKIFYAV 108


>UniRef50_O80953 Cluster: Putative uncharacterized protein
           At2g39280; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g39280 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 579

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -1

Query: 525 TKQITLLYTY*KSSNHCGIVDFTLAL**IVLNETIAFWGIRSSV*DYFFS*IISIMLQTN 346
           TK    +  Y  S NH   ++F  AL  +++ E  AFW +   + DYF       ML++ 
Sbjct: 323 TKMNISVICYLVSINHVQAMNFFAALLLLLMPEENAFWSLTGIIDDYFHDYYSEEMLESQ 382

Query: 345 LD 340
           +D
Sbjct: 383 VD 384


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,288,826
Number of Sequences: 1657284
Number of extensions: 10104043
Number of successful extensions: 14288
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14288
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)