Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0271
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.58 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   0.58 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 146 LVLFKVFCIIMQEI*ILLYLKNRYIVHVLLNFHLLHSKIL 27
           +VL + FC++ Q I  +  L N +  + L    ++H++IL
Sbjct: 189 VVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQVEIIHNEIL 228


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 146 LVLFKVFCIIMQEI*ILLYLKNRYIVHVLLNFHLLHSKIL 27
           +VL + FC++ Q I  +  L N +  + L    ++H++IL
Sbjct: 14  VVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQVEIIHNEIL 53


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 363 IMLQTNLDYITLRLNIITI 307
           +++QT LD++ L LNI TI
Sbjct: 64  LIVQTCLDFLLLALNISTI 82


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 122 IIMQEI*ILLYLKNRYIVHVLLNFHLLHSKILFSV 18
           I+ Q I ++    N Y+   + NF     KIL  +
Sbjct: 183 ILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMI 217


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 122 IIMQEI*ILLYLKNRYIVHVLLNFHLLHSKILFSV 18
           I+ Q I ++    N Y+   + NF     KIL  +
Sbjct: 109 ILTQAIFLMFVSYNIYVCQTVSNFEYFQRKILLMI 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,653
Number of Sequences: 336
Number of extensions: 3277
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)