Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0269
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 196 FWRVLELFIISNYIFNFVVNSEI--ACGNINLSVSTFMF 86
           F R+L+ FII+ Y+   + +S     C N  +   T +F
Sbjct: 37  FCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIF 75


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 174 LLLVITYLTLS*TLKLHVVILI 109
           +L +ITY TL   + LH+ +++
Sbjct: 229 ILFLITYATLQILVYLHLAVML 250


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 174 LLLVITYLTLS*TLKLHVVILI 109
           +L +ITY TL   + LH+ +++
Sbjct: 229 ILFLITYATLQILVYLHLAVML 250


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -1

Query: 189 ECWSYLLLVITYLTLS 142
           + W+YL+L+ T+  +S
Sbjct: 43  QAWTYLILLTTWTVIS 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,645
Number of Sequences: 336
Number of extensions: 3326
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)