Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0269
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0925 - 32768815-32769654                                         29   3.1  
04_01_0260 - 3506672-3508981                                           28   9.3  

>02_05_0925 - 32768815-32769654
          Length = 279

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 741 PPPPDKYFIWTVFIQGSFASP 679
           PPPP  Y +WT    G+FA P
Sbjct: 162 PPPPAHYPMWTSAAPGAFAGP 182


>04_01_0260 - 3506672-3508981
          Length = 769

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 193 WRVLELFIISNYIFNFVVNS 134
           WR+L  FI+S  +F F+VNS
Sbjct: 354 WRMLRRFILSLNLFRFLVNS 373


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,820,673
Number of Sequences: 37544
Number of extensions: 299397
Number of successful extensions: 533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)