Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0268
         (466 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0UCS2 Cluster: Putative uncharacterized protein; n=1; ...    33   2.3  
UniRef50_A7RL30 Cluster: Predicted protein; n=1; Nematostella ve...    33   3.1  
UniRef50_Q8IB56 Cluster: Putative uncharacterized protein MAL8P1...    33   4.1  
UniRef50_Q9CFA2 Cluster: Putative uncharacterized protein yqbK; ...    31   9.4  
UniRef50_Q53AN2 Cluster: UMTA; n=6; Trichocomaceae|Rep: UMTA - E...    31   9.4  

>UniRef50_Q0UCS2 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 788

 Score = 33.5 bits (73), Expect = 2.3
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 269 KTLNTNLLLNPVWTAWG-DVGTHVTWREGGLGGGK 370
           K L      +P W  W  D+G +  WRE G+ GGK
Sbjct: 730 KALQNGAGRDPQWLIWVVDIGVNKPWREAGISGGK 764


>UniRef50_A7RL30 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 4465

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = +2

Query: 200  PGHKIP*KKGIYWPHIEKIALYSKTLNTNLLLNPVWTAWGDVGT 331
            PG+ I     +Y PH + + LY+K     +L NP+WT  G+ GT
Sbjct: 1993 PGYCIKFWYHMYGPHTDTLNLYTK--RGGILGNPLWTKTGNQGT 2034


>UniRef50_Q8IB56 Cluster: Putative uncharacterized protein
           MAL8P1.49; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL8P1.49 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1466

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 287 NLYLRFLNTMQSFQCVASRFLFFKGFYDLVTKTFSSCL-ILFIYLFKLYAQNKSCTQADL 111
           N+Y+  +N + SF+CV ++F++   +Y+L+   F S + I   Y+   Y     C  +DL
Sbjct: 325 NIYIFSVN-INSFKCVINKFIYNDFYYNLLNSIFYSIINIPLQYVCDTYIYYLYCYDSDL 383


>UniRef50_Q9CFA2 Cluster: Putative uncharacterized protein yqbK;
           n=2; Lactococcus lactis|Rep: Putative uncharacterized
           protein yqbK - Lactococcus lactis subsp. lactis
           (Streptococcus lactis)
          Length = 1649

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 263 YSKTLNTNLLLNPVWTAWGDVGTHVTWREGGLGGGKVQLTNND 391
           Y KT +T+  +N  W  WG  GT  T+R+  L  G   L +N+
Sbjct: 639 YGKT-DTSSAINSGWDLWGGGGTVWTYRQAFLQNGNSYLIHNN 680


>UniRef50_Q53AN2 Cluster: UMTA; n=6; Trichocomaceae|Rep: UMTA -
           Emericella nidulans (Aspergillus nidulans)
          Length = 353

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 373 NLSPSQPPFPPGNVRPNVAPCCPDWI 296
           +LSP QP + P NV+  V  CC +W+
Sbjct: 121 DLSPIQPRWVPPNVQFEVDDCCDEWL 146


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,310,223
Number of Sequences: 1657284
Number of extensions: 10802006
Number of successful extensions: 34974
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34853
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)