Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0268
(466 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY028782-1|AAK32956.1| 501|Anopheles gambiae cytochrome P450 pr... 24 2.3
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 3.0
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 3.0
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 4.0
DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein O-fucosylt... 23 5.3
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 23 5.3
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 5.3
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 6.9
AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding pr... 23 6.9
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 6.9
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 6.9
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 22 9.2
AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450 CY... 22 9.2
>AY028782-1|AAK32956.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 248 QCVASRFLFFKGFYDLVTKTFSSCL 174
+ VA F+FF G ++ + T S CL
Sbjct: 294 EIVAQAFVFFLGGFETSSTTMSYCL 318
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.8 bits (49), Expect = 3.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 364 PSQPPFPPGNVRPNVAP 314
P +PP P G RP ++P
Sbjct: 265 PIRPPNPMGGPRPQISP 281
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.8 bits (49), Expect = 3.0
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -1
Query: 364 PSQPPFPPGNVRP 326
P++PP PG+VRP
Sbjct: 464 PNKPPGEPGSVRP 476
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 4.0
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -2
Query: 360 PNPPSLQVTCVPTS-PHAVQTG 298
P P L VTC PT H ++TG
Sbjct: 3 PQRPRLSVTCRPTKCLHPLRTG 24
>DQ139945-1|ABA29466.1| 399|Anopheles gambiae protein
O-fucosyltransferase 1 protein.
Length = 399
Score = 23.0 bits (47), Expect = 5.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 307 DSMGRRWDARY 339
DSM RRW RY
Sbjct: 167 DSMARRWSERY 177
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 137 NKSCTQADLIPWAFSSSRP*GGA*IMHG 54
N++ ++ DL P + S + P GG+ +HG
Sbjct: 398 NRAPSKEDLSPSSLSGTGPFGGSCQIHG 425
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 5.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -3
Query: 137 NKSCTQADLIPWAFSSSRP*GGA*IMHG 54
N++ ++ DL P + S + P GG+ +HG
Sbjct: 398 NRAPSKEDLSPSSLSGTGPFGGSCQIHG 425
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 22.6 bits (46), Expect = 6.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 370 LSPSQPPFPPGNVRPNVAPCCP 305
L+ S PP P + RPN P P
Sbjct: 692 LTESAPPIAPMSPRPNRFPSRP 713
>AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding
protein AgamOBP52 protein.
Length = 170
Score = 22.6 bits (46), Expect = 6.9
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1
Query: 403 LFLIVIIC*LNLSPSQPPFPPGNVRPNVAPCC 308
LF I C L S FPP + + CC
Sbjct: 5 LFTIPFRCPLFFSKHPKQFPPSKKQSELPYCC 36
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 22.6 bits (46), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 182 SCLILFIYLFKLYAQNKSCTQAD 114
+C + YL KLY K C++A+
Sbjct: 378 NCGCVLYYLPKLYEDTKICSRAN 400
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 22.6 bits (46), Expect = 6.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 182 SCLILFIYLFKLYAQNKSCTQAD 114
+C + YL KLY K C++A+
Sbjct: 378 NCGCVLYYLPKLYEDTKICSRAN 400
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 22.2 bits (45), Expect = 9.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 386 YLLVEPFPLPTPLP 345
Y ++ P PLP P+P
Sbjct: 632 YPIIIPLPLPIPVP 645
>AF487535-1|AAL93296.1| 494|Anopheles gambiae cytochrome P450
CYP6Z1 protein.
Length = 494
Score = 22.2 bits (45), Expect = 9.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -3
Query: 263 TMQSFQCVASRFLFFKGFYDLVTKTFSSCL 174
T+ QC A+ FLF+ D T T + L
Sbjct: 283 TLTDAQCAANVFLFYGAGADTSTGTITFTL 312
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,523
Number of Sequences: 2352
Number of extensions: 12203
Number of successful extensions: 34
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -