Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0267
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 33 0.14
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 33 0.14
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.14
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 33 0.14
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.19
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.19
Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical pr... 32 0.33
U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical pr... 32 0.33
AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear recep... 32 0.33
AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear recep... 32 0.33
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 31 0.43
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 2.3
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 4.0
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 28 4.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 4.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 4.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 4.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 4.0
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 4.0
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 4.0
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 5.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 5.3
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 28 5.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 5.3
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 28 5.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 7.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 9.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 27 9.3
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 27 9.3
AF125442-10|AAD12789.1| 84|Caenorhabditis elegans Nematode spe... 27 9.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 27 9.3
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 270 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIP 308
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGP-------CSVPGRPSCLPRGP-CSYQAAP 269
AP+CQ +C C L + P C+ P + +C P C Q AP
Sbjct: 203 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAP 249
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 271 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIP 309
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGP-------CSVPGRPSCLPRGP-CSYQAAP 269
AP+CQ +C C L + P C+ P + +C P C Q AP
Sbjct: 204 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAP 250
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 33.1 bits (72), Expect = 0.14
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 186 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIP 224
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGP-CSYQAAP 269
AP CQ +C C+LP P + SC P C Q AP
Sbjct: 309 APVCQQQCAPQCTLPSAPVCQQCQTSCQQFAPVCQEQCAP 348
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 410 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCHQQCIP 448
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIP 224
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+LP P + SC C Q P
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIP 224
>Z79604-3|CAD36502.1| 817|Caenorhabditis elegans Hypothetical
protein ZK662.3b protein.
Length = 817
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 112 AVSSQSIVRHDQPQLHAAKLAVATPVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTL 285
AV +Q+IV H Q QL AA VA V + APV +P+ AP PP +PT +
Sbjct: 366 AVQAQAIVNHTQ-QLAAA--VVAQQVVSNMAPVMPTVNPLDPLLAPAFIAPP-MPTPI 419
>Z79604-2|CAB01900.1| 780|Caenorhabditis elegans Hypothetical
protein ZK662.3a protein.
Length = 780
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 112 AVSSQSIVRHDQPQLHAAKLAVATPVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTL 285
AV +Q+IV H Q QL AA VA V + APV +P+ AP PP +PT +
Sbjct: 329 AVQAQAIVNHTQ-QLAAA--VVAQQVVSNMAPVMPTVNPLDPLLAPAFIAPP-MPTPI 382
>U00055-2|AAA50721.1| 223|Caenorhabditis elegans Hypothetical
protein R02F2.5 protein.
Length = 223
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 100 SPAEAVSSQSIVRHDQPQLHAAKLAVATPVAYHAAPVAYQADPVAYHAAPVA 255
+P V + + PQ A A A P AAPV Y + P+ AAPVA
Sbjct: 118 APRAPVPAPTPAPQAAPQATPAAPAQAYPQQQQAAPVVYGSQPMVMGAAPVA 169
>AF332205-1|AAK17976.1| 817|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 817
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 112 AVSSQSIVRHDQPQLHAAKLAVATPVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTL 285
AV +Q+IV H Q QL AA VA V + APV +P+ AP PP +PT +
Sbjct: 366 AVQAQAIVNHTQ-QLAAA--VVAQQVVSNMAPVMPTVNPLDPLLAPAFIAPP-MPTPI 419
>AF332204-1|AAK17975.1| 519|Caenorhabditis elegans nuclear receptor
NHR-48 protein.
Length = 519
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1
Query: 112 AVSSQSIVRHDQPQLHAAKLAVATPVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTL 285
AV +Q+IV H Q QL AA VA V + APV +P+ AP PP +PT +
Sbjct: 68 AVQAQAIVNHTQ-QLAAA--VVAQQVVSNMAPVMPTVNPLDPLLAPAFIAPP-MPTPI 121
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.43
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAP 269
AP CQ +C C+ P P + SC C Q P
Sbjct: 186 APVCQQQCAPQCTFPSAPACQQCQTSCQQTQQCQQQCIP 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/70 (22%), Positives = 23/70 (32%)
Frame = +3
Query: 150 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAESGSFQN 329
+AP CQ +C C P + SC C Q P S + +S
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 330 IVRHDQPQTI 359
+ PQ +
Sbjct: 332 VATTAAPQAV 341
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/70 (22%), Positives = 23/70 (32%)
Frame = +3
Query: 150 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAESGSFQN 329
+AP CQ +C C P + SC C Q P S + +S
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 330 IVRHDQPQTI 359
+ PQ +
Sbjct: 332 VATTAAPQVV 341
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Frame = +3
Query: 177 CYPCSLPRGPCSVPGRPSCLPR--GPC--------SYQAAPVAYHTSPLRYSSAESGSFQ 326
C PC+ R P P +P+ P+ P +YQ P AY T+P++ + + Q
Sbjct: 35 CDPCAAARAPYYPPQQPAYQPQYQQPAYQPHYQQPAYQPQPSAYQTAPVQQAYQQPAPVQ 94
Query: 327 NIVRHDQP 350
N +P
Sbjct: 95 NYQTVSEP 102
>Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical
protein W09C5.5 protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 159 RCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSP 290
RC C P P + P RP LP P + PVA ++P
Sbjct: 139 RCSNAARNNCGAPGAPGAQPSRPPILPPIPTTPTGFPVAALSTP 182
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 184 PVAYHAAPVAYQADPVAYHAAPVATRPPQLP 276
PV+Y P +Y P Y +P+A PP P
Sbjct: 58 PVSYAIPPPSYAQPPQPYAQSPIAAVPPPPP 88
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +3
Query: 150 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAES 314
SAP CQ +C C P + SC C Q P S + +S
Sbjct: 94 SAPVCQQQCAPQCQQQFAPACQQCQNSCQQTQQCQQQCTPQCQQPSTPQCQQCQS 148
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 177 CYPCSLPRGPCSVPGRPSCLPRGPCSY 257
C PC P+GP VPG P P P Y
Sbjct: 168 CLPC--PQGPAGVPGHPG-FPGDPGEY 191
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 184 PVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTLLHSGTPRL 309
PV H AP PV A P PP + SGTP L
Sbjct: 227 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 268
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +3
Query: 48 CFGRGVESWTSGCSRALLSR*SRFFPKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGRP 227
C G + S CS + S + P C P P P+ CC P GPC P P
Sbjct: 44 CSGCDLFPNRSCCSSSCCSS-QKPIPLACCP-PPPPPK---PCCQPAF---GPCC-PATP 94
Query: 228 SCLPRGPC 251
+C P+ PC
Sbjct: 95 NCCPK-PC 101
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 138 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSP 290
P P AP +CC R PC R C P G C P Y+ +P
Sbjct: 146 PPPPPAPEAPTQCCGSQPYGRTPC----RSGC-PNGDCGC-GRPCCYYQNP 190
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 184 PVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTLLHSGTPRL 309
PV H AP PV A P PP + SGTP L
Sbjct: 213 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 254
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 184 PVAYHAAPVAYQADPVAYHAAPVATRPPQLPTTLLHSGTPRL 309
PV H AP PV A P PP + SGTP L
Sbjct: 213 PVNAHGAPPPPPLPPVGAGAPPPPPPPPPPAQLMASSGTPSL 254
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGP-CSYQAAPVAYHTSPLRYSSAESGSFQN 329
AP CQ +C C++ P + +C P C Q AP S + +S
Sbjct: 185 APVCQQQCAPQCTISSAPQCQQCQTTCQQFAPVCQQQCAPQCQQPSAPQCQQCQSACQSP 244
Query: 330 IV 335
+V
Sbjct: 245 VV 246
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 138 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSC 233
P P P C C P +P P V G P C
Sbjct: 59 PPPCFGPACPPPCFGPACVPLAPIIVNGPPPC 90
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/58 (31%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Frame = +3
Query: 138 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCL-PR------GPCSYQAAPVAYHTSP 290
P P P C C P P P V G P C P GP +AP+ + P
Sbjct: 87 PPPCFGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPP 144
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 138 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSC 233
P P P C C P P P V G P C
Sbjct: 115 PPPCFGPACPPPCFGPACAPSAPIIVNGPPPC 146
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -2
Query: 126 LGRNGFSGRVVHGSSQKSSFRHRDQSTQYYDFG--EHVVDPRP 4
LG+ + R GS K FRH+ Q+ FG E V+DP P
Sbjct: 515 LGKPTVAYRECLGSPYKFHFRHKKQTGGQGQFGEIEGVIDPLP 557
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 153 APRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAESGSFQN 329
AP CQ C C P + R S P R +C+PRG C + +Y + S +
Sbjct: 318 APGCQPGCICLPGYIRRD--SSP-RSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPIS 374
Query: 330 IVRHDQPQ 353
+QP+
Sbjct: 375 CATRNQPR 382
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 153 APRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAESGSFQN 329
AP CQ C C P + R S P R +C+PRG C + +Y + S +
Sbjct: 109 APGCQPGCICLPGYIRRD--SSP-RSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPIS 165
Query: 330 IVRHDQPQ 353
+QP+
Sbjct: 166 CATRNQPR 173
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 118 KRLQRESSAREQPEVQLSTPRPKHT 44
+++QRE+ REQ Q S P P HT
Sbjct: 548 QQVQRENLNREQYSTQSSQPHPPHT 572
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPC 251
P PR PC P R C P G C
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTC 1947
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 171 RCCYPCSL-PRGP--CSVPGRPSCLPRG 245
+C YP S P P C V R CLPRG
Sbjct: 976 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1003
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPC 251
P PR PC P R C P G C
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTC 2531
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 171 RCCYPCSL-PRGP--CSVPGRPSCLPRG 245
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPC 251
P PR PC P R C P G C
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTC 1947
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 171 RCCYPCSL-PRGP--CSVPGRPSCLPRG 245
+C YP S P P C V R CLPRG
Sbjct: 976 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1003
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPC 251
P PR PC P R C P G C
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTC 2531
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 171 RCCYPCSL-PRGP--CSVPGRPSCLPRG 245
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLR 296
PC+ P P P+C+P CS A PL+
Sbjct: 224 PCAAPVAPVYASAAPACVPGAVCSAGVCQCAGAYEPLQ 261
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 183 PCSLPRGPCSVPGRPSCLPRGPC 251
P PR PC P R C P G C
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTC 2531
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 171 RCCYPCSL-PRGP--CSVPGRPSCLPRG 245
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 184 PVAYHAAPVAYQADPVAYHAAPVATRPPQLP 276
P Y PVA A P YH AP PP P
Sbjct: 325 PPPYSYYPVAPAAAPQVYHYAPPPPPPPPHP 355
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/54 (25%), Positives = 19/54 (35%)
Frame = +3
Query: 153 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTSPLRYSSAES 314
AP C+ +C C P P + SC C Q P S + +S
Sbjct: 423 APVCEQQCAPQCYQPSAPQCQQCQASCQQTQQCQQQCIPQCQQPSAPQCQQCQS 476
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/43 (27%), Positives = 16/43 (37%)
Frame = +3
Query: 159 RCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQAAPVAYHTS 287
+CQ +C C P P + SC C Q P+ S
Sbjct: 218 QCQQQCAPQCQQPSAPQCQQCQSSCQQTQQCQQQCIPLCNQPS 260
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 132 CAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSYQA 263
C P P AP CC P P PC P P C QA
Sbjct: 100 CGPSPVPAP-----CCPPPPAPAAPCCPPPPPPTPSPLVCCKQA 138
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 144 PASAPRCQARCCYPCSLPRGPCSVPGRP 227
P++ +C+ CC P P GP VPG+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKP 118
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 177 CYPCSLPRGPCSVPGRPSCLPRGPCSY 257
C PC P+GP VPG P P P Y
Sbjct: 168 CLPC--PQGPRGVPGHPG-FPGDPGEY 191
>AF125442-10|AAD12789.1| 84|Caenorhabditis elegans Nematode
specific peptide family,group b protein 6 protein.
Length = 84
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 175 VATPVAYHAAPVAYQADPVAY 237
VA+P Y AAPVA A P AY
Sbjct: 28 VASPYYYGAAPVAASAYPYAY 48
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 144 PASAPRCQARCCYPCSLPRGPCSVPGRP 227
P++ +C+ CC P P GP VPG+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKP 118
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,754,866
Number of Sequences: 27780
Number of extensions: 187854
Number of successful extensions: 788
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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