Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0265
(486 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23887| Best HMM Match : Pre-SET (HMM E-Value=0.05) 67 6e-12
SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_37903| Best HMM Match : Pre-SET (HMM E-Value=0.11) 65 3e-11
SB_2690| Best HMM Match : Pre-SET (HMM E-Value=0.11) 65 3e-11
SB_40180| Best HMM Match : Pre-SET (HMM E-Value=0.11) 65 3e-11
SB_21917| Best HMM Match : CXC (HMM E-Value=0.22) 64 6e-11
SB_11735| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_44608| Best HMM Match : Pre-SET (HMM E-Value=2.9) 61 5e-10
SB_35556| Best HMM Match : Pre-SET (HMM E-Value=2.9) 61 5e-10
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 56 1e-08
SB_10195| Best HMM Match : CXC (HMM E-Value=0.003) 54 6e-08
SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037) 50 1e-06
SB_40999| Best HMM Match : SAM_1 (HMM E-Value=7.9) 46 2e-05
SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 44 9e-05
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_22850| Best HMM Match : CXC (HMM E-Value=0.22) 43 2e-04
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5) 36 0.018
SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.031
SB_45702| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 32 0.29
SB_11394| Best HMM Match : GntR (HMM E-Value=7.9) 31 0.38
SB_8115| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.38
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.88
SB_34845| Best HMM Match : CXC (HMM E-Value=0.03) 30 0.88
SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71) 30 0.88
SB_13856| Best HMM Match : CXC (HMM E-Value=0.021) 30 0.88
SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24) 29 2.7
SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05) 29 2.7
SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.6
SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12) 28 4.7
SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09) 28 4.7
SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_7691| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_35473| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_23887| Best HMM Match : Pre-SET (HMM E-Value=0.05)
Length = 922
Score = 67.3 bits (157), Expect = 6e-12
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFC 78
W G L P+ WGWK + L+P +T A LL CNCK GCS+ KC C++ L C
Sbjct: 839 WRGIALPPEDWGWKEVDGKLQPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDC 898
Query: 77 SMACTHCQG 51
+ AC C+G
Sbjct: 899 TAACGTCRG 907
Score = 53.2 bits (122), Expect = 1e-07
Identities = 49/165 (29%), Positives = 68/165 (41%), Gaps = 6/165 (3%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITNGVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLPP 308
++F +++ + + G LL +Y K T LD L+Y F K + QV SLPP
Sbjct: 762 DIFHQADAAKNDIAAAGETDLLCLYKGLKDET-LDSLRYARFCQKISTGNTQVQPESLPP 820
Query: 307 TSVAAHQHLFRVYYQVQV--GLVI---SWTLKPGVGS*SPIH*SQFKLYFHQHLRDFSTQ 143
TS AA H RVY+QVQ G+ + W K G P Q H L +
Sbjct: 821 TSAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLQPQRTDQSAA--HPSLLELIRC 878
Query: 142 HFATARKGVVQNVVAEKLDCFVPWHAHTVKARSCSNVESPTLEDS 8
+ T + LDC T + +SC N P L +S
Sbjct: 879 NCKTGCSSRKCSCKRHDLDCTAA--CGTCRGQSCDNSAPPDLSES 921
>SB_38543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = -2
Query: 221 GWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGC-SAKCGCRKVGLFCSMACTHCQG 51
GW+L LEP++T LPPAP+ LL CNC + C S++C RK G+ C+ AC C+G
Sbjct: 273 GWRLDKEKLEPIKTDLPPAPQSLLQIVRCNCMQDCSSSRCFWRKNGIECTPACGQCKG 330
>SB_37903| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 220
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFC 78
W G L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C
Sbjct: 137 WRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDC 196
Query: 77 SMACTHCQG 51
+ AC C+G
Sbjct: 197 TAACGTCRG 205
Score = 41.9 bits (94), Expect = 3e-04
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 7/166 (4%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITN-GVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLP 311
++F +++ + + G LL +Y K T LD L+Y F K + QV SLP
Sbjct: 59 DIFHQADAAKNDIAAAAGETALLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLP 117
Query: 310 PTSVAAHQHLFRVYYQVQV--GLVI---SWTLKPGVGS*SPIH*SQFKLYFHQHLRDFST 146
S AA H RVY+QVQ G+ + W K G P Q H L +
Sbjct: 118 QISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAA--HPSLLELIR 175
Query: 145 QHFATARKGVVQNVVAEKLDCFVPWHAHTVKARSCSNVESPTLEDS 8
+ T + LDC T + +SC N P L S
Sbjct: 176 CNCKTGCSSRKCSCKRHDLDCTAA--CGTCRGQSCDNSSPPDLSKS 219
>SB_2690| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 715
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFC 78
W G L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C
Sbjct: 632 WRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDC 691
Query: 77 SMACTHCQG 51
+ AC C+G
Sbjct: 692 TAACGTCRG 700
Score = 41.9 bits (94), Expect = 3e-04
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 7/166 (4%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITN-GVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLP 311
++F +++ + + G LL +Y K T LD L+Y F K + QV SLP
Sbjct: 554 DIFHQADAAKNDIAAAAGETALLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLP 612
Query: 310 PTSVAAHQHLFRVYYQVQV--GLVI---SWTLKPGVGS*SPIH*SQFKLYFHQHLRDFST 146
S AA H RVY+QVQ G+ + W K G P Q H L +
Sbjct: 613 QISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAA--HPSLLELIR 670
Query: 145 QHFATARKGVVQNVVAEKLDCFVPWHAHTVKARSCSNVESPTLEDS 8
+ T + LDC T + +SC N P L S
Sbjct: 671 CNCKTGCSSRKCSCKRHDLDCTAA--CGTCRGQSCDNSSPPDLSKS 714
>SB_40180| Best HMM Match : Pre-SET (HMM E-Value=0.11)
Length = 291
Score = 65.3 bits (152), Expect = 3e-11
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFC 78
W G L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C
Sbjct: 208 WRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDC 267
Query: 77 SMACTHCQG 51
+ AC C+G
Sbjct: 268 TAACGTCRG 276
Score = 43.2 bits (97), Expect = 1e-04
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITN-GVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLP 311
++F +++ + + G + LL +Y K T LD L+Y F K + QV SLP
Sbjct: 130 DIFHQADAAKNDIAAAAGERVLLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLP 188
Query: 310 PTSVAAHQHLFRVYYQVQV--GLVI---SWTLKPGVGS*SPIH*SQFKLYFHQHLRDFST 146
S AA H RVY+QVQ G+ + W K G P Q H L +
Sbjct: 189 QISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAA--HPSLLELIR 246
Query: 145 QHFATARKGVVQNVVAEKLDCFVPWHAHTVKARSCSNVESPTLEDS 8
+ T + LDC T + +SC N P L S
Sbjct: 247 CNCKTGCSSRKCSCKRHDLDCTAA--CGTCRGQSCDNSSPPDLSKS 290
>SB_21917| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 470
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 257 SWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRKVGLF 81
+W GN + P+ WGW + PVQ P AP +LL CNC C + C C K GL
Sbjct: 374 AWKGNNVSPEEWGWAVTCTGFVPVQMSEPAAPAQLLRNITCNCGGHCETRSCTCFKNGLQ 433
Query: 80 CSMACTHCQG 51
C+ AC +G
Sbjct: 434 CTPACGQYKG 443
>SB_11735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 63.7 bits (148), Expect = 8e-11
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = -2
Query: 269 LPSSSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRK 93
L +W GN P+ WGW + PVQ P AP +LL CNC C + C C K
Sbjct: 239 LQVQAWKGNDASPEEWGWAVTCTGFVPVQMSEPAAPAQLLRNITCNCGGHCETRLCTCFK 298
Query: 92 VGLFCSMACTHCQG 51
GL C+ AC +G
Sbjct: 299 NGLQCTPACGQYKG 312
Score = 32.3 bits (70), Expect = 0.22
Identities = 25/69 (36%), Positives = 32/69 (46%)
Frame = -3
Query: 463 STQQHVITNGVQFLLAMYGAPKKTTCLDKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQH 284
S++ + T G + LL MYG+ +LQ K V LPPTS AA H
Sbjct: 175 SSKVAIETAGERALLIMYGSKVDDLKTARLQRFQ-TKVATAAGYVPPEKLPPTSDAARFH 233
Query: 283 LFRVYYQVQ 257
RV+ QVQ
Sbjct: 234 SHRVFLQVQ 242
>SB_2462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFC 78
W G L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C
Sbjct: 488 WRGIALPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDC 547
Query: 77 SMACTHCQ 54
+ AC C+
Sbjct: 548 TAACGTCR 555
Score = 41.9 bits (94), Expect = 3e-04
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 7/166 (4%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITN-GVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLP 311
++F +++ + + G LL +Y K T LD L+Y F K + QV SLP
Sbjct: 410 DIFHQADAAKNDIAAAAGETDLLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLP 468
Query: 310 PTSVAAHQHLFRVYYQVQV--GLVI---SWTLKPGVGS*SPIH*SQFKLYFHQHLRDFST 146
S AA H RVY+QVQ G+ + W K G P Q H L +
Sbjct: 469 QISAAAIYHSLRVYHQVQQWRGIALPPEDWGWKEVDGKLLPQRTDQSAA--HPSLLELIR 526
Query: 145 QHFATARKGVVQNVVAEKLDCFVPWHAHTVKARSCSNVESPTLEDS 8
+ T + LDC T + +SC N P L +S
Sbjct: 527 CNCKTGCSSRKCSCKRHDLDCTAA--CGTCRRQSCDNSAPPDLSES 570
>SB_44608| Best HMM Match : Pre-SET (HMM E-Value=2.9)
Length = 91
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -2
Query: 239 LDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFCSMACT 63
L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C+ AC
Sbjct: 13 LPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDCTAACG 72
Query: 62 HCQG 51
C+G
Sbjct: 73 TCRG 76
>SB_35556| Best HMM Match : Pre-SET (HMM E-Value=2.9)
Length = 91
Score = 60.9 bits (141), Expect = 5e-10
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -2
Query: 239 LDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSA-KCGCRKVGLFCSMACT 63
L P+ WGWK + L P +T A LL CNCK GCS+ KC C++ L C+ AC
Sbjct: 13 LPPEDWGWKEVDGKLLPQRTDQSAAHPSLLELIRCNCKTGCSSRKCSCKRHDLDCTAACG 72
Query: 62 HCQG 51
C+G
Sbjct: 73 TCRG 76
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/61 (40%), Positives = 30/61 (49%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLFCSMACTHCQ 54
P+ GW+ L+PV PAP LL + C CK GC C C GL CS AC+
Sbjct: 694 PEDSGWERSGIELKPVLMSKDPAPSSLLELSTCGCKSGCQRNCSCSNNGLSCSKACSCMA 753
Query: 53 G 51
G
Sbjct: 754 G 754
Score = 30.7 bits (66), Expect = 0.67
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = -3
Query: 400 KKTTCLDKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQHLFRVYYQVQV 254
+K+T D+L+Y F + KKQ + LPPTS + HL R YQ V
Sbjct: 637 RKSTSADELRYFLFCQ----KKQKS-ERLPPTSNSLQHHLERANYQALV 680
>SB_10195| Best HMM Match : CXC (HMM E-Value=0.003)
Length = 1365
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNC-KKGCSA-KCGCRKVGLFCSMAC 66
P +GWKL A+ PV T L PAP+ +L+ C C + CS +C CRK GL C+ C
Sbjct: 1270 PSDYGWKLEADEWVPVMTSLKPAPDAVLHLVKCGCLTQRCSTNRCQCRKAGLPCTDLC 1327
>SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -2
Query: 224 WGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKG-C-SAKCGCRKVGLFCSMACTHC 57
W W+ PV T LPPAPE +++ C C K C + +C CRK GL C+ C+ C
Sbjct: 368 WKWQDAEEIWVPVMTDLPPAPEAIIHLVRCGCAKDRCINQRCKCRKSGLGCTDLCSCC 425
>SB_48611| Best HMM Match : SKI (HMM E-Value=0.00037)
Length = 926
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNC-KKGCSA-KCGCRKVGLFCSMAC 66
P +GWKL A+ PV T L PAP+ +L+ C C + CS + CRK GL C+ C
Sbjct: 654 PSDYGWKLEADEWVPVMTSLKPAPDAVLHLVKCGCLTERCSTNRWQCRKAGLPCTDLC 711
>SB_40999| Best HMM Match : SAM_1 (HMM E-Value=7.9)
Length = 233
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITNGVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLPP 308
++F +++ + + G LL +Y K T LD L+Y F K + QV SLP
Sbjct: 154 DIFHQADAAKNDIAAAGETALLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLPQ 212
Query: 307 TSVAAHQHLFRVYYQVQ 257
S AA H RVY+QVQ
Sbjct: 213 ISAAAIYHSLRVYHQVQ 229
>SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 484 EVFKNSNSTQQHVITNGVQFLLAMYGAPKKTTCLDKLQYTSFV-KNTRNKKQVNLASLPP 308
++F +++ + + G LL +Y K T LD L+Y F K + QV SLP
Sbjct: 499 DIFHQADAAKNDIAAAGETALLCLYKGLKDET-LDSLRYARFCQKISTGNTQVRPESLPQ 557
Query: 307 TSVAAHQHLFRVYYQVQVG 251
S AA H RVY+QV G
Sbjct: 558 ISAAAIYHSLRVYHQVHGG 576
>SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 233 PKAWGWKLIAN--TLEPVQTLLPPAPERLLNTTFCNCKKG-C-SAKCGCRKVGLFCSMAC 66
P+ +GWK +PV T PPAP+ ++ C C K C + +C C+K GL C+ C
Sbjct: 278 PEKYGWKWNDGDKVWDPVMTTSPPAPQVIIQLVKCKCAKDRCVTNRCQCKKSGLKCTNLC 337
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 43.6 bits (98), Expect = 9e-05
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2
Query: 170 PAPERLLNTTFCNCKKGCSAKCGCRKVGLFCSMACTHCQG 51
PAP LL + C CK GC C GL CS AC+ G
Sbjct: 1344 PAPSSLLELSTCGCKSGCQRNCSFNNNGLSCSEACSCIAG 1383
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKG-CSAK--CGCRKVGLFCSMAC 66
P+ GW+ A LEP+ PAPE LL T C+C+K C C C+ + C+ AC
Sbjct: 594 PENNGWRNNAGQLEPLLMPRDPAPEGLLELTTCSCEKSRCKRDDLCPCKSNQMPCTEAC 652
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -3
Query: 430 QFLLAMYGAPKKT-TCLDKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQHLFRVYYQVQV 254
+F+ ++Y + KK D ++Y F + KKQ + LPPT+ + H+ R YQ +
Sbjct: 526 RFVCSLYTSAKKAGVTADDVRYWMFCQ----KKQTS-ECLPPTNDSLSHHIKRANYQAYI 580
>SB_22850| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 418
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 173 PPAPERLLNTTFCNCKKGCSAK-CGCRKVGLFCSMACTHCQG 51
P AP +LL CNC C + C C K GL C+ AC C+G
Sbjct: 356 PAAPAQLLRNIKCNCGGHCETRLCTCFKNGLQCTPACGQCKG 397
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 36.3 bits (80), Expect = 0.013
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAK---CGCRKVGLFCSMAC 66
P G K+ LEP+ PAP LL T C C K + C C+ + C+ AC
Sbjct: 1274 PDGNGGKITNGRLEPLLMSQDPAPLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEAC 1332
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 427 FLLAMYGAPKKT-TCLDKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQHLFRVYYQVQVG 251
F+ ++Y K DK++Y F + ++ + LPPTS + QH+ R YQ
Sbjct: 1207 FVCSLYTTSTKAGMTADKIRYWMFCQKHQSSDR-----LPPTSDSLKQHIIRANYQT--- 1258
Query: 250 LVISWTLKPGVGS*SP 203
+ + L+P V SP
Sbjct: 1259 FIWKYCLQPMVPLPSP 1274
>SB_20396| Best HMM Match : SEC-C (HMM E-Value=1.5)
Length = 715
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -2
Query: 263 SSSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCK 126
S++ L N P+ GW++ A +EP+ PAPE LL C+C+
Sbjct: 57 STTPLQNLPSPENNGWRINAGQIEPLLMSRDPAPEGLLELIKCSCE 102
>SB_10193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 233 PKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLFCSMAC 66
P + W A T P +P + T C+CK C+ +C C K L C++ C
Sbjct: 770 PDQFAWVKEAGTWVPRWITIPEVSKACSELTKCSCKGVCT-RCKCIKAHLECTLLC 824
>SB_45702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -2
Query: 233 PKAWGWKLIAN-TLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLFCSMACTHC 57
P WGW+ N T P+ +LL P+ + C C+ K C L C+ C C
Sbjct: 265 PADWGWESSDNSTWRPLWSLL-PSMSTCIKLVKCGCQPDKGCKRRCINTWLKCTALC-RC 322
Query: 56 QG 51
G
Sbjct: 323 GG 324
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = -3
Query: 400 KKTTCLDKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQHLFRVYYQVQV 254
+K+T D+L+Y F + + K+ LPPTS + HL R YQ V
Sbjct: 1032 RKSTSADELRYFLFCQKKQKSKR-----LPPTSNSLQHHLERAKYQALV 1075
>SB_11394| Best HMM Match : GntR (HMM E-Value=7.9)
Length = 451
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 140 FCNCKKGCSAKCGCRKVGLFCSMACTHCQ 54
FC+C+ C C CR V C +AC C+
Sbjct: 143 FCSCRVAC---CSCRVVCYSCRVACCSCR 168
>SB_8115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 31.5 bits (68), Expect = 0.38
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMAC 66
CK GC A+C C + L CS C
Sbjct: 88 CKIGCPARCTCTQASLECSALC 109
>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 230 KAWGWKLIANTLEPVQTLLPPAPERL-LNTTFCNCKKGCSA-KCGCRKVGLFCSMAC 66
K W + ++ E + L ER +++ C CKK C A C C GL C+ C
Sbjct: 502 KDWQYSFVSMQEEVCSSKLHLCFERSRMHSLSCQCKKKCVAPNCTCVSNGLVCTDVC 558
>SB_57869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 30.3 bits (65), Expect = 0.88
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMACT 63
CK GC A C C K CS C+
Sbjct: 310 CKIGCPASCTCTKASSKCSSLCS 332
>SB_34845| Best HMM Match : CXC (HMM E-Value=0.03)
Length = 1397
Score = 30.3 bits (65), Expect = 0.88
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 340 KKQVNLASLPPTSVAAHQHLFRVYYQVQV 254
KKQ LPPT HQ + R +YQ+ V
Sbjct: 333 KKQARSQQLPPTDATLHQAVLRGHYQLLV 361
>SB_33902| Best HMM Match : Metallothionein (HMM E-Value=0.71)
Length = 361
Score = 30.3 bits (65), Expect = 0.88
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Frame = -2
Query: 239 LDPKAWGWK--LIANTLEP--VQTLLPPAPERLLNTTFCNCK--KGCSA-KCGCRKVGLF 81
+DP +G+ + + +L P V T +P AP+ +L CN + K C +C C + L
Sbjct: 273 IDPVEYGYNRHVPSRSLIPTTVPTGVPLAPDEILPLIKCNYEGDKRCKTQRCSCSRARLP 332
Query: 80 CSMAC 66
C++ C
Sbjct: 333 CTLFC 337
>SB_13856| Best HMM Match : CXC (HMM E-Value=0.021)
Length = 464
Score = 30.3 bits (65), Expect = 0.88
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 340 KKQVNLASLPPTSVAAHQHLFRVYYQVQV 254
KKQ LPPT HQ + R +YQ+ V
Sbjct: 205 KKQARSQQLPPTDATLHQAVLRGHYQLLV 233
>SB_49350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 340 KKQVNLASLPPTSVAAHQHLFRVYYQV 260
KKQ LPPTS A Q + R +YQ+
Sbjct: 758 KKQERSERLPPTSAALKQAILRSHYQL 784
>SB_28123| Best HMM Match : zf-NF-X1 (HMM E-Value=0.24)
Length = 453
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMACTHCQGPIMLEC 33
CK+GC KC + C C C P +C
Sbjct: 51 CKEGCQNKCTHSECKKKCGEPCVPCAEPCAWKC 83
>SB_13997| Best HMM Match : EGF_CA (HMM E-Value=1.2e-05)
Length = 770
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCS 75
CK GC A+C C + L CS
Sbjct: 363 CKIGCPARCTCTQASLKCS 381
>SB_5146| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2077
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMACTHCQGPIMLEC 33
C+K C KC K C C C P EC
Sbjct: 1946 CQKQCENKCEHSKCKNRCGEPCVPCAEPCAWEC 1978
>SB_14425| Best HMM Match : LRR_1 (HMM E-Value=3.3e-12)
Length = 1356
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -3
Query: 433 VQFLLAMYGAPKKTTCLDKLQYTSFVKNTRNKKQVNLASL 314
V+FL +Y ++ C + LQ+ NK+Q+ L+++
Sbjct: 417 VEFLWVLYTVKRRRACFNDLQFYQNFLGGSNKQQLKLSNI 456
>SB_4810| Best HMM Match : NACHT (HMM E-Value=1.4e-09)
Length = 682
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = -3
Query: 475 KNSNSTQQHVITNGVQFLLAMYGAPKKTTCLDKLQYTSFVKNTRNKKQVNLASL 314
++ N T+ ++ + ++FL +Y ++ C + LQ+ NK+Q+ L+++
Sbjct: 124 QSENKTK--LVWSYIEFLWVLYTVQRRRACFNDLQFYQNFLGGSNKQQLKLSNI 175
>SB_22765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1387
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMAC-THC 57
C K C ++C R G CS C HC
Sbjct: 1228 CDKSCPSECCSRAKGALCSEDCEIHC 1253
>SB_7691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 254 WLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLL 150
W DP L A T EPV+ +LP PE+ L
Sbjct: 112 WSEGDYDPHRMAGNLCAQT-EPVREILPTLPEKQL 145
>SB_35473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 131 CKKGCSAKCGCRKVGLFCSMACT 63
CK GC A+C C + L S C+
Sbjct: 101 CKIGCPARCTCTQASLKRSALCS 123
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 27.1 bits (57), Expect = 8.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 110 KCGCRKVGLFCSMACTHCQG 51
K CRK+GL + C+ C+G
Sbjct: 4 KSNCRKIGLIERLTCSACKG 23
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,488,535
Number of Sequences: 59808
Number of extensions: 308108
Number of successful extensions: 818
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1026164244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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