Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0265
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           26   0.79 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   4.2  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   7.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            22   9.7  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   9.7  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 54  LTVCACHGTKQSNFSATTFCTTPFLAVAKCCVEKSLR 164
           +TV  C G   S    +    T FL    CC E  LR
Sbjct: 113 VTVNKCEGKCNSQVQPSVITATGFLKECYCCRESFLR 149


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/42 (26%), Positives = 16/42 (38%)
 Frame = -3

Query: 382  DKLQYTSFVKNTRNKKQVNLASLPPTSVAAHQHLFRVYYQVQ 257
            D + Y   +K+       +    P  S   H H F +YY  Q
Sbjct: 1275 DFIDYAYLMKHIEQHDYWSALVYPFASETYHYHQFNLYYDAQ 1316


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 462 QLNNMLSPTEFNFFLLCT 409
           +LN++LS  +++FF  CT
Sbjct: 286 KLNSILSRADWSFFYQCT 303


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -2

Query: 188 VQTLLPPAPERLLNTTFCNCKKGCSAKCGCRK 93
           V +   P P++   +    C+  C   C C+K
Sbjct: 31  VYSCCAPCPQKACISEAVKCQTSCLPGCVCKK 62


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 137 CNCKKGCSAKCGC 99
           C+CK  C  +C C
Sbjct: 752 CDCKMECPKQCTC 764


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -1

Query: 90  WTVLFHGMHTLSRPDHARMLSH 25
           W V++ G+  +  PD A+++ +
Sbjct: 656 WNVMYDGVLRIPLPDEAKVIGY 677


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,941
Number of Sequences: 2352
Number of extensions: 11133
Number of successful extensions: 49
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)