Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0265
(486 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei... 30 1.5
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me... 30 1.5
BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p pro... 30 1.5
AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA... 30 1.5
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA... 30 1.5
AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p pro... 30 1.9
BT003477-1|AAO39480.1| 977|Drosophila melanogaster RE60364p pro... 29 3.4
AE014298-913|AAF46177.2| 977|Drosophila melanogaster CG3973-PA ... 29 3.4
BT011127-1|AAR82794.1| 591|Drosophila melanogaster LD02520p pro... 29 4.5
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 29 4.5
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 29 4.5
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 29 4.5
AE014296-2571|AAS64990.1| 82|Drosophila melanogaster CG6244-PA... 28 7.8
AE013599-1731|AAF58365.1| 950|Drosophila melanogaster CG6061-PA... 28 7.8
>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
protein.
Length = 1408
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 260 SSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLF 81
S W G + +A G A + T +P AP++ L C C G + GLF
Sbjct: 827 SGWTGKRCSERATG--CYAGQCQNGGTCMPGAPDKALQP-HCRCAPGWT--------GLF 875
Query: 80 CSMACTHCQG 51
C+ A C+G
Sbjct: 876 CAEAIDQCRG 885
>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
D.melanogaster serrate(Ser) mRNA, complete cds. ).
Length = 1404
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 260 SSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLF 81
S W G + +A G A + T +P AP++ L C C G + GLF
Sbjct: 823 SGWTGKRCSERATG--CYAGQCQNGGTCMPGAPDKALQP-HCRCAPGWT--------GLF 871
Query: 80 CSMACTHCQG 51
C+ A C+G
Sbjct: 872 CAEAIDQCRG 881
>BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p
protein.
Length = 1105
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -2
Query: 272 ILPSSSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNT 144
+L S ++L +++ K+W +K I +++ PV ++P E +NT
Sbjct: 509 LLKSRTFLKHKVPIKSWIFKQICSSVRPVHPVMPALVEVFVNT 551
>AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA
protein.
Length = 1105
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -2
Query: 272 ILPSSSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNT 144
+L S ++L +++ K+W +K I +++ PV ++P E +NT
Sbjct: 509 LLKSRTFLKHKVPIKSWIFKQICSSVRPVHPVMPALVEVFVNT 551
>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
protein.
Length = 1407
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 260 SSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLF 81
S W G + +A G A + T +P AP++ L C C G + GLF
Sbjct: 826 SGWTGKRCSERATG--CYAGQCQNGGTCMPGAPDKALQP-HCRCAPGWT--------GLF 874
Query: 80 CSMACTHCQG 51
C+ A C+G
Sbjct: 875 CAEAIDQCRG 884
>AY128478-1|AAM75071.1| 950|Drosophila melanogaster RE42104p
protein.
Length = 950
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -2
Query: 260 SSWLGNQLDPKAWGWKLIANTLEPVQTLLPPAPERLLNTTFCNCKKGCSAKCGCRKVGLF 81
S W G + +A G A + T +P AP++ L C C G + GLF
Sbjct: 600 SGWTGKRCSERAAG--CYAGQCQNGGTCMPGAPDKALQP-HCRCAPGWT--------GLF 648
Query: 80 CSMACTHCQG 51
C+ A C+G
Sbjct: 649 CAEAIDQCRG 658
>BT003477-1|AAO39480.1| 977|Drosophila melanogaster RE60364p
protein.
Length = 977
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 173 PPAPERLLNTTFCNCKKGCSAKCGCRKVGL 84
PPA R+ N+ CN G + CG VG+
Sbjct: 364 PPAARRVFNSPNCNGGPGTGSSCGTGVVGV 393
>AE014298-913|AAF46177.2| 977|Drosophila melanogaster CG3973-PA
protein.
Length = 977
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 173 PPAPERLLNTTFCNCKKGCSAKCGCRKVGL 84
PPA R+ N+ CN G + CG VG+
Sbjct: 364 PPAARRVFNSPNCNGGPGTGSSCGTGVVGV 393
>BT011127-1|AAR82794.1| 591|Drosophila melanogaster LD02520p
protein.
Length = 591
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 VQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRKVGLFCSMACT 63
+Q+++P +PE + N F NCK + C FC +CT
Sbjct: 534 IQSVVPVSPECVDNPYFANCKLIVKGRYCSNPYYTQFCCRSCT 576
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 VQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRKVGLFCSMACT 63
+Q+++P +PE + N F NCK + C FC +CT
Sbjct: 2841 IQSVVPVSPECVDNPYFANCKLIVKGRYCSNPYYTQFCCRSCT 2883
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 VQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRKVGLFCSMACT 63
+Q+++P +PE + N F NCK + C FC +CT
Sbjct: 2719 IQSVVPVSPECVDNPYFANCKLIVKGRYCSNPYYTQFCCRSCT 2761
>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
matrix protein papilinprotein.
Length = 2174
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 188 VQTLLPPAPERLLNTTFCNCKKGCSAK-CGCRKVGLFCSMACT 63
+Q+++P +PE + N F NCK + C FC +CT
Sbjct: 2117 IQSVVPVSPECVDNPYFANCKLIVKGRYCSNPYYTQFCCRSCT 2159
>AE014296-2571|AAS64990.1| 82|Drosophila melanogaster CG6244-PA
protein.
Length = 82
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 191 PVQTLLPPAPERLLNTTFCNCKKGCSAKCG-CRKVGLFCSMACTHCQ 54
P + + P P L + FCN K+ C AK +K+G + CT CQ
Sbjct: 12 PRKKNIQPLPI-LFDCPFCNHKQSCEAKLDKAKKIG---RITCTVCQ 54
>AE013599-1731|AAF58365.1| 950|Drosophila melanogaster CG6061-PA
protein.
Length = 950
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -3
Query: 442 TNGVQFLLAMYGAPKKTTCLDKLQYTSFVKN-TR-----NKKQVNLASLPPTSVAAHQHL 281
+NG ++++ G P+ +T + YT +V+N TR + +Q + P + HQ L
Sbjct: 610 SNGAKYMICNSGVPQSSTSAMRRGYTGYVENKTRRPPPISPQQHRFKQMGPQQQSKHQQL 669
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,849,330
Number of Sequences: 53049
Number of extensions: 475741
Number of successful extensions: 1429
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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