BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0263 (688 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P59107 Cluster: Exoribonuclease 2; n=42; Gammaproteobac... 118 1e-25 UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 76 9e-13 UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 72 1e-11 UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 72 1e-11 UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 72 1e-11 UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 72 1e-11 UniRef50_P57354 Cluster: Exoribonuclease 2; n=6; Gammaproteobact... 71 2e-11 UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep: ... 59 1e-07 UniRef50_P44440 Cluster: Exoribonuclease 2; n=21; Pasteurellacea... 57 5e-07 UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 53 6e-06 UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04 UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 46 7e-04 UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 46 0.001 UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 42 0.019 UniRef50_A4MZ81 Cluster: Exoribonuclease II; n=1; Haemophilus in... 38 0.30 UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp. ... 37 0.40 UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|R... 37 0.53 UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 0.93 UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 36 1.2 UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 36 1.2 UniRef50_Q83868 Cluster: Polypeptide; n=1; Nilaparvata lugens re... 34 2.8 UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 34 3.7 UniRef50_Q026P0 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9 UniRef50_A4AAT4 Cluster: Colicin I receptor; n=1; Congregibacter... 33 8.6 UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 33 8.6 >UniRef50_P59107 Cluster: Exoribonuclease 2; n=42; Gammaproteobacteria|Rep: Exoribonuclease 2 - Shigella flexneri Length = 644 Score = 118 bits (284), Expect = 1e-25 Identities = 53/59 (89%), Positives = 54/59 (91%) Frame = +1 Query: 79 KFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 255 K + K RL IVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL Sbjct: 89 KVQGKNDRLTIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 147 Score = 88.6 bits (210), Expect = 1e-16 Identities = 40/47 (85%), Positives = 42/47 (89%) Frame = +3 Query: 231 RSFFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLEGG 371 RSF+ TQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEML+ G Sbjct: 141 RSFY-AELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLDEG 186 >UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryota|Rep: beta-galactosidase - Entamoeba histolytica HM-1:IMSS Length = 86 Score = 75.8 bits (178), Expect = 9e-13 Identities = 37/54 (68%), Positives = 39/54 (72%), Gaps = 1/54 (1%) Frame = +2 Query: 413 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGV*RRGPHRS-PFPTVAQPEWRMA 571 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGV P + +WRMA Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMA 58 >UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; Erwinia amylovora|Rep: Putative uncharacterized protein - Erwinia amylovora (Fire blight bacteria) Length = 123 Score = 72.1 bits (169), Expect = 1e-11 Identities = 31/31 (100%), Positives = 31/31 (100%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 98 Score = 45.2 bits (102), Expect = 0.002 Identities = 20/28 (71%), Positives = 21/28 (75%) Frame = +3 Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572 PF SEEARTDRP QQLR LNGEW+ Sbjct: 93 PFASWRNSEEARTDRPSQQLRXLNGEWR 120 >UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organisms|Rep: LacZ-alpha peptide - Escherichia coli Length = 90 Score = 72.1 bits (169), Expect = 1e-11 Identities = 31/31 (100%), Positives = 31/31 (100%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 52 Score = 35.5 bits (78), Expect = 1.2 Identities = 17/23 (73%), Positives = 17/23 (73%) Frame = +3 Query: 489 PFRQLAYSEEARTDRPFQQLRSL 557 PF SEEARTDRP QQLRSL Sbjct: 47 PFASWRNSEEARTDRPSQQLRSL 69 >UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ protein - Phage M13mp18 Length = 102 Score = 72.1 bits (169), Expect = 1e-11 Identities = 31/31 (100%), Positives = 31/31 (100%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 56 Score = 47.2 bits (107), Expect = 4e-04 Identities = 21/28 (75%), Positives = 22/28 (78%) Frame = +3 Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572 PF SEEARTDRP QQLRSLNGEW+ Sbjct: 51 PFASWRNSEEARTDRPSQQLRSLNGEWR 78 >UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Beta-galactosidase - Escherichia coli (strain K12) Length = 1024 Score = 72.1 bits (169), Expect = 1e-11 Identities = 31/31 (100%), Positives = 31/31 (100%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 38 Score = 47.2 bits (107), Expect = 4e-04 Identities = 21/28 (75%), Positives = 22/28 (78%) Frame = +3 Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572 PF SEEARTDRP QQLRSLNGEW+ Sbjct: 33 PFASWRNSEEARTDRPSQQLRSLNGEWR 60 >UniRef50_P57354 Cluster: Exoribonuclease 2; n=6; Gammaproteobacteria|Rep: Exoribonuclease 2 - Buchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisumsymbiotic bacterium) Length = 649 Score = 71.3 bits (167), Expect = 2e-11 Identities = 39/84 (46%), Positives = 53/84 (63%) Frame = +1 Query: 4 KKNREIPQKPRKKLG*TVPDSFRGVKFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFK 183 +K+REI + +KL + F G K K RL IVPD+P LKD I C+ + + F+ Sbjct: 67 EKDREIVEP--EKLIEPFLNRFVG-KIEKKDNRLFIVPDYPFLKDLITCQPNKNCINIFQ 123 Query: 184 EGDWAVAEMRRHPLKGDRSFYAEL 255 GDWAVA++++H LKGD FYAEL Sbjct: 124 NGDWAVAQLKKHKLKGDHLFYAEL 147 Score = 43.2 bits (97), Expect = 0.006 Identities = 16/28 (57%), Positives = 22/28 (78%) Frame = +3 Query: 255 TQYITFGDDHFVPWWVTLARHNLEKEAP 338 T+ IT DD +PWWVTLARH+L+++ P Sbjct: 148 TEKITQEDDPLIPWWVTLARHDLDRKEP 175 >UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep: Exoribonuclease 2 - Vibrio cholerae Length = 678 Score = 58.8 bits (136), Expect = 1e-07 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%) Frame = +1 Query: 100 RLAIVPDHPLLKD-AIPCRAARGLNH-EFKEGDWAVAEMRRHPLKGDRSFYAEL 255 +L + PDHP LK ++ + +GLN +F+EGDW VA + RHPLKGD F+ ++ Sbjct: 96 KLNVAPDHPQLKKLSLKAKTKKGLNEADFQEGDWVVAHLVRHPLKGDDGFFVQI 149 Score = 34.7 bits (76), Expect = 2.1 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 264 ITFGDDHFVPWWVTLARHNLEKEAPDGV 347 IT +D PWWVTLA ++L P G+ Sbjct: 153 ITDANDKIAPWWVTLAENDLPNSEPAGI 180 >UniRef50_P44440 Cluster: Exoribonuclease 2; n=21; Pasteurellaceae|Rep: Exoribonuclease 2 - Haemophilus influenzae Length = 659 Score = 56.8 bits (131), Expect = 5e-07 Identities = 24/61 (39%), Positives = 38/61 (62%) Frame = +1 Query: 76 VKFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 255 V+F K +L ++ DHP + I + A+ + E +EGDW VA ++ HPL+ DR FYA + Sbjct: 89 VRFN-KDKKLQVLVDHPSINQPIGAQQAKSVKEELQEGDWVVANLKTHPLRDDRFFYATI 147 Query: 256 H 258 + Sbjct: 148 N 148 Score = 37.5 bits (83), Expect = 0.30 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Frame = +3 Query: 237 FFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT-EMLE 365 FF Q I DD PWWVTLARH + G EML+ Sbjct: 142 FFYATINQLICRADDELAPWWVTLARHEQSRYPVRGAEPYEMLD 185 >UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep: Beta-galactosidase - Yersinia pseudotuberculosis Length = 1066 Score = 53.2 bits (122), Expect = 6e-06 Identities = 21/31 (67%), Positives = 24/31 (77%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507 L +L RRDWENP +TQ +RL AHPPF SWR Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWR 45 >UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; Enterobacter sakazakii ATCC BAA-894|Rep: Putative uncharacterized protein - Enterobacter sakazakii ATCC BAA-894 Length = 1043 Score = 47.6 bits (108), Expect = 3e-04 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = +1 Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRIAKR 519 LA +L R DW+NP +T +NRL +H P WR A R Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR 52 >UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella pneumoniae Length = 1034 Score = 46.4 bits (105), Expect = 7e-04 Identities = 19/28 (67%), Positives = 20/28 (71%) Frame = +1 Query: 424 VLQRRDWENPGVTQLNRLAAHPPFASWR 507 VL R DW N +T LNRL AHP FASWR Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWR 44 >UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia spumigena CCY 9414 Length = 72 Score = 45.6 bits (103), Expect = 0.001 Identities = 19/23 (82%), Positives = 22/23 (95%) Frame = +3 Query: 510 SEEARTDRPFQQLRSLNGEWQIV 578 SEEARTDRP QQLRSLNGEW+++ Sbjct: 50 SEEARTDRPSQQLRSLNGEWRLM 72 >UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp. PE36 Length = 45 Score = 41.5 bits (93), Expect = 0.019 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = -3 Query: 578 YNLPFAIQAAQLLERAIGAGLFAI 507 + PFAIQAAQLL RAIGAGLFAI Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAI 31 >UniRef50_A4MZ81 Cluster: Exoribonuclease II; n=1; Haemophilus influenzae 22.1-21|Rep: Exoribonuclease II - Haemophilus influenzae 22.1-21 Length = 47 Score = 37.5 bits (83), Expect = 0.30 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +1 Query: 157 ARGLNHEFKEGDWAVAEMRRHPLKGDR 237 A+ + E +EGDW VA ++ HPL+ DR Sbjct: 5 AKSVKEELQEGDWVVANLKTHPLRDDR 31 >UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp. PE36|Rep: Exoribonuclease II - Moritella sp. PE36 Length = 647 Score = 37.1 bits (82), Expect = 0.40 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = +1 Query: 85 RAKMTR--LAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELH 258 R MT+ L ++ D P++ I + + +GDW VA+++ H LK D SF AE+ Sbjct: 89 RISMTKNKLTVLADSPVINMPIRAKLVGLGKQKVNDGDWVVAQLKSHALK-DGSFAAEV- 146 Query: 259 NTSLLVTTT 285 T + T T Sbjct: 147 -TGFVATAT 154 Score = 35.9 bits (79), Expect = 0.93 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 216 SSAERRSFFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAP 338 S A + F T ++ D PWWVTLAR +L K+ P Sbjct: 134 SHALKDGSFAAEVTGFVATATDPNAPWWVTLARQDLAKDVP 174 >UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|Rep: Exoribonuclease II - Psychromonas ingrahamii (strain 37) Length = 656 Score = 36.7 bits (81), Expect = 0.53 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Frame = +1 Query: 91 KMTRLAIVPDHPLLKDAIPCRAARGL-NHEFKEGDWAVAEMRRHPLKGD 234 K ++I+P +PLLK + ++ L + +++GDW E+ H L+G+ Sbjct: 93 KQKNISIIPKNPLLKGFFKIKGSQSLQSRGYQDGDWVKVELVSHALEGN 141 >UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus lactis|Rep: Beta-galactosidase - Lactococcus lactis subsp. lactis (Streptococcus lactis) Length = 998 Score = 35.9 bits (79), Expect = 0.93 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +1 Query: 424 VLQRRDWENPGVTQLNRLAAHPP 492 VL+R+DWENP V+ NRL H P Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31 >UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; uncultured bacterium|Rep: Non-ribosomal peptide synthetase - uncultured bacterium Length = 338 Score = 35.5 bits (78), Expect = 1.2 Identities = 20/40 (50%), Positives = 20/40 (50%) Frame = -3 Query: 464 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLEHFGSD 345 W GF C YDSL GELGTGPPLE G D Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDGID 297 >UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteobacteria|Rep: Beta-galactosidase - Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) Length = 1039 Score = 35.5 bits (78), Expect = 1.2 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 424 VLQRRDWENPGVTQLNRLAAHPPFASWR 507 ++ RRDWENP Q+N++ AH P ++ Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFK 34 >UniRef50_Q83868 Cluster: Polypeptide; n=1; Nilaparvata lugens reovirus|Rep: Polypeptide - Nilaparvata lugens reovirus Length = 431 Score = 34.3 bits (75), Expect = 2.8 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 610 FNANFNKILTLTICHSPFRLRNCWKGRSVRASSLYASWRKGDVLQ 476 F + + L I H R NCWKGRS R S++ +W DVL+ Sbjct: 155 FKDQYITVDRLRITHE--RFINCWKGRSFR--SVHVNWASNDVLE 195 >UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma japonicum|Rep: SJCHGC09076 protein - Schistosoma japonicum (Blood fluke) Length = 109 Score = 33.9 bits (74), Expect = 3.7 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +1 Query: 418 AVVLQRRDWENPGVTQLNRLAAHPPFASWRIAKRPAPIALSNS 546 A L+RR+ +NPG QLN L A P F K+ P LS + Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSKN 99 >UniRef50_Q026P0 Cluster: Putative uncharacterized protein; n=1; Solibacter usitatus Ellin6076|Rep: Putative uncharacterized protein - Solibacter usitatus (strain Ellin6076) Length = 283 Score = 33.5 bits (73), Expect = 4.9 Identities = 34/90 (37%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Frame = +1 Query: 61 DSFRGVKFRAKMTRLAIVPDHPLLKDAIPC------RAARGLNHEFKE-GDWAVAEMRRH 219 D R F + R A + D P L D R AR + F E G WAVAE RH Sbjct: 97 DETRAAGFDDLLIRRAALADSPELGDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRH 156 Query: 220 ---PLKGDRSFYA--ELHNTSLLVTTTLYR 294 PL+ + YA EL SL V T YR Sbjct: 157 TLEPLRIILATYALLELLGGSLGVATATYR 186 >UniRef50_A4AAT4 Cluster: Colicin I receptor; n=1; Congregibacter litoralis KT71|Rep: Colicin I receptor - Congregibacter litoralis KT71 Length = 652 Score = 32.7 bits (71), Expect = 8.6 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%) Frame = -1 Query: 316 WRARVTHHGTKWSSPKVMYCVVQHRKNDRLSADDGAFRQPPSRLL*TRGSGHGLRGKEW- 140 W R HH W + ++ + R G F Q +RLL SG G G EW Sbjct: 292 WFIRAYHHLQDWEADVERVGERRNLTSYRAHTVGGLF-QANTRLL----SGEGSVGAEWV 346 Query: 139 --RLLRVDDQERWPDGSFL 89 R + +DD+E PDG+ L Sbjct: 347 GRRGVAIDDEEFTPDGTLL 365 >UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7; Trichocomaceae|Rep: C6 finger domain protein, putative - Aspergillus fumigatus (Sartorya fumigata) Length = 1148 Score = 32.7 bits (71), Expect = 8.6 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 Query: 418 PVNCNTTHYRANWVPGPPSSISVATPSGA 332 PV N +R W+PGPP+ SV +P+G+ Sbjct: 619 PVTDNPPDFRKEWIPGPPTR-SVLSPAGS 646 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 773,403,201 Number of Sequences: 1657284 Number of extensions: 17365463 Number of successful extensions: 42608 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 41076 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42600 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 53719013270 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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