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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0263
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P59107 Cluster: Exoribonuclease 2; n=42; Gammaproteobac...   118   1e-25
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    76   9e-13
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    72   1e-11
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    72   1e-11
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    72   1e-11
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    72   1e-11
UniRef50_P57354 Cluster: Exoribonuclease 2; n=6; Gammaproteobact...    71   2e-11
UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep: ...    59   1e-07
UniRef50_P44440 Cluster: Exoribonuclease 2; n=21; Pasteurellacea...    57   5e-07
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    53   6e-06
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    48   3e-04
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    46   7e-04
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    46   0.001
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria...    42   0.019
UniRef50_A4MZ81 Cluster: Exoribonuclease II; n=1; Haemophilus in...    38   0.30 
UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp. ...    37   0.40 
UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|R...    37   0.53 
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la...    36   0.93 
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    36   1.2  
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba...    36   1.2  
UniRef50_Q83868 Cluster: Polypeptide; n=1; Nilaparvata lugens re...    34   2.8  
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j...    34   3.7  
UniRef50_Q026P0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_A4AAT4 Cluster: Colicin I receptor; n=1; Congregibacter...    33   8.6  
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7...    33   8.6  

>UniRef50_P59107 Cluster: Exoribonuclease 2; n=42;
           Gammaproteobacteria|Rep: Exoribonuclease 2 - Shigella
           flexneri
          Length = 644

 Score =  118 bits (284), Expect = 1e-25
 Identities = 53/59 (89%), Positives = 54/59 (91%)
 Frame = +1

Query: 79  KFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 255
           K + K  RL IVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL
Sbjct: 89  KVQGKNDRLTIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 147



 Score = 88.6 bits (210), Expect = 1e-16
 Identities = 40/47 (85%), Positives = 42/47 (89%)
 Frame = +3

Query: 231 RSFFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLEGG 371
           RSF+    TQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEML+ G
Sbjct: 141 RSFY-AELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVATEMLDEG 186


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 75.8 bits (178), Expect = 9e-13
 Identities = 37/54 (68%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +2

Query: 413 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGV*RRGPHRS-PFPTVAQPEWRMA 571
           HWPSFYNVVTGKTLALPNLIALQHIPLSPAGV         P   +   +WRMA
Sbjct: 5   HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMA 58


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507
           LAVVLQRRDWENPGVTQLNRLAAHPPFASWR
Sbjct: 68  LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 98



 Score = 45.2 bits (102), Expect = 0.002
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = +3

Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572
           PF     SEEARTDRP QQLR LNGEW+
Sbjct: 93  PFASWRNSEEARTDRPSQQLRXLNGEWR 120


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507
           LAVVLQRRDWENPGVTQLNRLAAHPPFASWR
Sbjct: 22  LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 52



 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/23 (73%), Positives = 17/23 (73%)
 Frame = +3

Query: 489 PFRQLAYSEEARTDRPFQQLRSL 557
           PF     SEEARTDRP QQLRSL
Sbjct: 47  PFASWRNSEEARTDRPSQQLRSL 69


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507
           LAVVLQRRDWENPGVTQLNRLAAHPPFASWR
Sbjct: 26  LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 56



 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +3

Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572
           PF     SEEARTDRP QQLRSLNGEW+
Sbjct: 51  PFASWRNSEEARTDRPSQQLRSLNGEWR 78


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507
           LAVVLQRRDWENPGVTQLNRLAAHPPFASWR
Sbjct: 8   LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 38



 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = +3

Query: 489 PFRQLAYSEEARTDRPFQQLRSLNGEWQ 572
           PF     SEEARTDRP QQLRSLNGEW+
Sbjct: 33  PFASWRNSEEARTDRPSQQLRSLNGEWR 60


>UniRef50_P57354 Cluster: Exoribonuclease 2; n=6;
           Gammaproteobacteria|Rep: Exoribonuclease 2 - Buchnera
           aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon
           pisumsymbiotic bacterium)
          Length = 649

 Score = 71.3 bits (167), Expect = 2e-11
 Identities = 39/84 (46%), Positives = 53/84 (63%)
 Frame = +1

Query: 4   KKNREIPQKPRKKLG*TVPDSFRGVKFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFK 183
           +K+REI +   +KL     + F G K   K  RL IVPD+P LKD I C+  +   + F+
Sbjct: 67  EKDREIVEP--EKLIEPFLNRFVG-KIEKKDNRLFIVPDYPFLKDLITCQPNKNCINIFQ 123

Query: 184 EGDWAVAEMRRHPLKGDRSFYAEL 255
            GDWAVA++++H LKGD  FYAEL
Sbjct: 124 NGDWAVAQLKKHKLKGDHLFYAEL 147



 Score = 43.2 bits (97), Expect = 0.006
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +3

Query: 255 TQYITFGDDHFVPWWVTLARHNLEKEAP 338
           T+ IT  DD  +PWWVTLARH+L+++ P
Sbjct: 148 TEKITQEDDPLIPWWVTLARHDLDRKEP 175


>UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep:
           Exoribonuclease 2 - Vibrio cholerae
          Length = 678

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 RLAIVPDHPLLKD-AIPCRAARGLNH-EFKEGDWAVAEMRRHPLKGDRSFYAEL 255
           +L + PDHP LK  ++  +  +GLN  +F+EGDW VA + RHPLKGD  F+ ++
Sbjct: 96  KLNVAPDHPQLKKLSLKAKTKKGLNEADFQEGDWVVAHLVRHPLKGDDGFFVQI 149



 Score = 34.7 bits (76), Expect = 2.1
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 264 ITFGDDHFVPWWVTLARHNLEKEAPDGV 347
           IT  +D   PWWVTLA ++L    P G+
Sbjct: 153 ITDANDKIAPWWVTLAENDLPNSEPAGI 180


>UniRef50_P44440 Cluster: Exoribonuclease 2; n=21;
           Pasteurellaceae|Rep: Exoribonuclease 2 - Haemophilus
           influenzae
          Length = 659

 Score = 56.8 bits (131), Expect = 5e-07
 Identities = 24/61 (39%), Positives = 38/61 (62%)
 Frame = +1

Query: 76  VKFRAKMTRLAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAEL 255
           V+F  K  +L ++ DHP +   I  + A+ +  E +EGDW VA ++ HPL+ DR FYA +
Sbjct: 89  VRFN-KDKKLQVLVDHPSINQPIGAQQAKSVKEELQEGDWVVANLKTHPLRDDRFFYATI 147

Query: 256 H 258
           +
Sbjct: 148 N 148



 Score = 37.5 bits (83), Expect = 0.30
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 237 FFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT-EMLE 365
           FF     Q I   DD   PWWVTLARH   +    G    EML+
Sbjct: 142 FFYATINQLICRADDELAPWWVTLARHEQSRYPVRGAEPYEMLD 185


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 507
           L  +L RRDWENP +TQ +RL AHPPF SWR
Sbjct: 15  LPQILSRRDWENPQITQYHRLEAHPPFHSWR 45


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 47.6 bits (108), Expect = 3e-04
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +1

Query: 415 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRIAKR 519
           LA +L R DW+NP +T +NRL +H P   WR A R
Sbjct: 18  LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR 52


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 19/28 (67%), Positives = 20/28 (71%)
 Frame = +1

Query: 424 VLQRRDWENPGVTQLNRLAAHPPFASWR 507
           VL R DW N  +T LNRL AHP FASWR
Sbjct: 17  VLAREDWHNQTITHLNRLPAHPVFASWR 44


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = +3

Query: 510 SEEARTDRPFQQLRSLNGEWQIV 578
           SEEARTDRP QQLRSLNGEW+++
Sbjct: 50  SEEARTDRPSQQLRSLNGEWRLM 72


>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
           Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
           PE36
          Length = 45

 Score = 41.5 bits (93), Expect = 0.019
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -3

Query: 578 YNLPFAIQAAQLLERAIGAGLFAI 507
           +  PFAIQAAQLL RAIGAGLFAI
Sbjct: 8   HQAPFAIQAAQLLGRAIGAGLFAI 31


>UniRef50_A4MZ81 Cluster: Exoribonuclease II; n=1; Haemophilus
           influenzae 22.1-21|Rep: Exoribonuclease II - Haemophilus
           influenzae 22.1-21
          Length = 47

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 157 ARGLNHEFKEGDWAVAEMRRHPLKGDR 237
           A+ +  E +EGDW VA ++ HPL+ DR
Sbjct: 5   AKSVKEELQEGDWVVANLKTHPLRDDR 31


>UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp.
           PE36|Rep: Exoribonuclease II - Moritella sp. PE36
          Length = 647

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = +1

Query: 85  RAKMTR--LAIVPDHPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELH 258
           R  MT+  L ++ D P++   I  +       +  +GDW VA+++ H LK D SF AE+ 
Sbjct: 89  RISMTKNKLTVLADSPVINMPIRAKLVGLGKQKVNDGDWVVAQLKSHALK-DGSFAAEV- 146

Query: 259 NTSLLVTTT 285
            T  + T T
Sbjct: 147 -TGFVATAT 154



 Score = 35.9 bits (79), Expect = 0.93
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 216 SSAERRSFFLC*TTQYITFGDDHFVPWWVTLARHNLEKEAP 338
           S A +   F    T ++    D   PWWVTLAR +L K+ P
Sbjct: 134 SHALKDGSFAAEVTGFVATATDPNAPWWVTLARQDLAKDVP 174


>UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|Rep:
           Exoribonuclease II - Psychromonas ingrahamii (strain 37)
          Length = 656

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +1

Query: 91  KMTRLAIVPDHPLLKDAIPCRAARGL-NHEFKEGDWAVAEMRRHPLKGD 234
           K   ++I+P +PLLK     + ++ L +  +++GDW   E+  H L+G+
Sbjct: 93  KQKNISIIPKNPLLKGFFKIKGSQSLQSRGYQDGDWVKVELVSHALEGN 141


>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
           lactis|Rep: Beta-galactosidase - Lactococcus lactis
           subsp. lactis (Streptococcus lactis)
          Length = 998

 Score = 35.9 bits (79), Expect = 0.93
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 424 VLQRRDWENPGVTQLNRLAAHPP 492
           VL+R+DWENP V+  NRL  H P
Sbjct: 9   VLERKDWENPVVSNWNRLPMHTP 31


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 20/40 (50%), Positives = 20/40 (50%)
 Frame = -3

Query: 464 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLEHFGSD 345
           W   GF     C        YDSL GELGTGPPLE  G D
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDGID 297


>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
           Gammaproteobacteria|Rep: Beta-galactosidase -
           Pseudoalteromonas haloplanktis (Alteromonas
           haloplanktis)
          Length = 1039

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 424 VLQRRDWENPGVTQLNRLAAHPPFASWR 507
           ++ RRDWENP   Q+N++ AH P   ++
Sbjct: 7   IINRRDWENPITVQVNQVKAHSPLNGFK 34


>UniRef50_Q83868 Cluster: Polypeptide; n=1; Nilaparvata lugens
           reovirus|Rep: Polypeptide - Nilaparvata lugens reovirus
          Length = 431

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -1

Query: 610 FNANFNKILTLTICHSPFRLRNCWKGRSVRASSLYASWRKGDVLQ 476
           F   +  +  L I H   R  NCWKGRS R  S++ +W   DVL+
Sbjct: 155 FKDQYITVDRLRITHE--RFINCWKGRSFR--SVHVNWASNDVLE 195


>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09076 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 109

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +1

Query: 418 AVVLQRRDWENPGVTQLNRLAAHPPFASWRIAKRPAPIALSNS 546
           A  L+RR+ +NPG  QLN L A P F      K+  P  LS +
Sbjct: 57  AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSKN 99


>UniRef50_Q026P0 Cluster: Putative uncharacterized protein; n=1;
           Solibacter usitatus Ellin6076|Rep: Putative
           uncharacterized protein - Solibacter usitatus (strain
           Ellin6076)
          Length = 283

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 34/90 (37%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
 Frame = +1

Query: 61  DSFRGVKFRAKMTRLAIVPDHPLLKDAIPC------RAARGLNHEFKE-GDWAVAEMRRH 219
           D  R   F   + R A + D P L D          R AR +   F E G WAVAE  RH
Sbjct: 97  DETRAAGFDDLLIRRAALADSPELGDRFRAAVEDRMRDARRMGMNFGEVGGWAVAEEHRH 156

Query: 220 ---PLKGDRSFYA--ELHNTSLLVTTTLYR 294
              PL+   + YA  EL   SL V T  YR
Sbjct: 157 TLEPLRIILATYALLELLGGSLGVATATYR 186


>UniRef50_A4AAT4 Cluster: Colicin I receptor; n=1; Congregibacter
           litoralis KT71|Rep: Colicin I receptor - Congregibacter
           litoralis KT71
          Length = 652

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
 Frame = -1

Query: 316 WRARVTHHGTKWSSPKVMYCVVQHRKNDRLSADDGAFRQPPSRLL*TRGSGHGLRGKEW- 140
           W  R  HH   W +        ++  + R     G F Q  +RLL    SG G  G EW 
Sbjct: 292 WFIRAYHHLQDWEADVERVGERRNLTSYRAHTVGGLF-QANTRLL----SGEGSVGAEWV 346

Query: 139 --RLLRVDDQERWPDGSFL 89
             R + +DD+E  PDG+ L
Sbjct: 347 GRRGVAIDDEEFTPDGTLL 365


>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
           Trichocomaceae|Rep: C6 finger domain protein, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 1148

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 418 PVNCNTTHYRANWVPGPPSSISVATPSGA 332
           PV  N   +R  W+PGPP+  SV +P+G+
Sbjct: 619 PVTDNPPDFRKEWIPGPPTR-SVLSPAGS 646


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,403,201
Number of Sequences: 1657284
Number of extensions: 17365463
Number of successful extensions: 42608
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 41076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42600
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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