Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0263
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0080 - 17957276-17957676,17957810-17957921,17958001-179581...    33   0.28 
10_08_0707 + 20037301-20037633,20037862-20038248                       31   1.1  
09_02_0036 + 3217163-3217584,3217752-3218322                           30   1.5  
07_03_1510 + 27264999-27265371,27265485-27265546,27265768-272664...    30   2.0  
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297...    29   3.5  
10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800     28   8.0  
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193...    28   8.0  
05_03_0258 - 11153709-11156090                                         28   8.0  

>01_05_0080 -
           17957276-17957676,17957810-17957921,17958001-17958126,
           17958199-17958331,17960069-17960193,17960314-17960409,
           17960430-17960621,17960694-17960800,17961318-17961426,
           17961538-17961624,17963017-17963103,17964254-17964379
          Length = 566

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = +1

Query: 121 HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGD--RSFYAELHNTSLLVTTTLYR 294
           H L+   I C  A+ L H   +  W + +   + L G   R F    HN    VT TL +
Sbjct: 270 HQLMPSIITCMVAKRLGHRLSDNHWELRDFSAN-LVGSVCRRFGHAYHNIQTRVTRTLVQ 328

Query: 295 GGL 303
           G L
Sbjct: 329 GFL 331


>10_08_0707 + 20037301-20037633,20037862-20038248
          Length = 239

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 261 YITFGDDHFVPWWVTLARHNLEKEAPDGV-----ATEMLEG 368
           ++ + DD FVP WV   R   E+E  +G+     A E LEG
Sbjct: 104 WVAYVDDKFVPAWVATFRGKTEEEKAEGMKQLLAAVETLEG 144


>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 404 ITIHWPSFYNVV-TGKTLALPNLIALQH 484
           I+  W  F N+V +G TL++PN + LQH
Sbjct: 69  ISAGWSRFINLVQSGPTLSIPNYVLLQH 96


>07_03_1510 +
           27264999-27265371,27265485-27265546,27265768-27266436,
           27266842-27267288
          Length = 516

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/67 (22%), Positives = 32/67 (47%)
 Frame = +1

Query: 157 ARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELHNTSLLVTTTLYRGGLPLRAIIWKKKH 336
           A G  H+F   D  + ++++H + GD+    ++ N     T +++         IW++  
Sbjct: 132 AAGETHQFNTDDGQIDKIKKHDIAGDQEPTEDIDNLLEAPTRSMHINDQRYIPRIWQRIL 191

Query: 337 QTASLPK 357
           +  S+PK
Sbjct: 192 EYWSIPK 198


>05_06_0240 -
           26629218-26629323,26629412-26629490,26629656-26629761,
           26629844-26629947,26630069-26630168,26630256-26630351,
           26630464-26630541,26630603-26630671,26630766-26630846,
           26630879-26630935,26631016-26631105,26631192-26631278,
           26631690-26631794,26631899-26631994,26632222-26632397,
           26632847-26633006,26633151-26633600
          Length = 679

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -3

Query: 551 AQLLERAIGAGLFAIRQLAKGGCAARRL 468
           A L   A G GL   RQL++GGC  +RL
Sbjct: 85  ASLPGDANGRGLLLARQLSRGGCGEQRL 112


>10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800
          Length = 332

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 382 WVPGPPSSISVATPSGASFSRLWRARVTHH 293
           W PG P+  + A     S+   W  RV+HH
Sbjct: 164 WWPGFPAEDAAAAYGRQSYGDQWALRVSHH 193


>10_08_0021 +
           14217455-14217505,14217742-14217909,14219137-14219340,
           14219429-14219601,14219970-14220066,14220183-14220336,
           14222029-14222209,14222858-14222898,14223146-14223231,
           14223282-14223389,14223538-14223579
          Length = 434

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 499 SWRIAKRPAPIALSNSCA 552
           SWR+A  P P +LS +CA
Sbjct: 331 SWRVANTPPPKSLSRTCA 348


>05_03_0258 - 11153709-11156090
          Length = 793

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 590 NINAYNLPFAIQAAQLLERAIGAGLFAIRQLAKGGCAARRLSWVT 456
           N+N YNL F +   +    A+   L  + ++++ GC   R++W T
Sbjct: 390 NVNTYNLIFGMLGKKSRFTAM---LEMLEEMSRSGCTPNRVTWNT 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,965
Number of Sequences: 37544
Number of extensions: 510444
Number of successful extensions: 1351
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)