Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0262
         (672 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3HM84 Cluster: ORF1; n=2; Aspergillus|Rep: ORF1 - Aspe...    35   2.1  
UniRef50_A7RMP0 Cluster: Predicted protein; n=1; Nematostella ve...    34   3.6  
UniRef50_A0BCA1 Cluster: Chromosome undetermined scaffold_10, wh...    34   3.6  
UniRef50_A7TGU9 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q54Q25 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_A4VDA8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q3HM84 Cluster: ORF1; n=2; Aspergillus|Rep: ORF1 -
           Aspergillus niger
          Length = 303

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 86  IFNLMVISLIE*KLIVKFYRYFFYCIEFTKIEKWCLHCLFVLLI 217
           I N  ++S ++ + + K+Y + F C + TK  +W   CLF LLI
Sbjct: 109 IMNHPLVSFLQNEKVKKYYIFLFNCEKITKYSQW-FKCLFNLLI 151


>UniRef50_A7RMP0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 708

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 463 SRQYQKCALFYWPCHAWFTKYCY-ALGLGINKAFTEVQIKTIQHL 594
           SR   +C +F WPC  W  +  +  LGL + +AF E  ++ +  +
Sbjct: 42  SRHANRCPIFTWPCPEWIEENLFHKLGLIVVQAFLENNLEMLMRI 86


>UniRef50_A0BCA1 Cluster: Chromosome undetermined scaffold_10, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_10, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1571

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -2

Query: 338  QQYRKKVRYIYITSLLLTIVFIIDCIMNTPF 246
            Q   K +R++Y  S LLTI+ II CI+N  F
Sbjct: 988  QSESKTIRWLYYISFLLTILLIILCILNNVF 1018


>UniRef50_A7TGU9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 801

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 472 YQKCALFYWPCHAWFTKYCYALGLGINKAFTEVQIKTIQHLEHMEHFKI--RNSLLSLRV 645
           YQ  +L + P   W   Y Y  GLG+ + +T  +    Q +EH  +  +  + S+L L +
Sbjct: 606 YQSGSLRFSPQAMWNLGYMYEYGLGVERNYTAARNYYNQVIEHDPNLYLAGKASVLKLYI 665

Query: 646 EPVTNWPFG 672
           + + +W  G
Sbjct: 666 KSLFSWVTG 674


>UniRef50_Q54Q25 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 409

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = -3

Query: 241 IAPRFPSPNKQNKQAMQTPFLNFRKFNAIKKVSIKLYD*FLFNK*NYHQIENRVLASPLI 62
           I P  P P  QN    Q   +NFR  N  KK +++  +    N  NY Q+ N  + SP  
Sbjct: 4   IGPARPPPTTQNNDNEQKTEVNFRDSNNNKKRTLEENNNNDNNNNNYKQLNNDDIQSPQP 63

Query: 61  P 59
           P
Sbjct: 64  P 64


>UniRef50_A4VDA8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 351

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -3

Query: 214 KQNKQA-MQTPFLNFRKFNAIKKVSIKLYD*FLFNK*NYHQIENRVLASPLIPNVAK--- 47
           +QN Q+ +  P    R+F+   K S      FLF    +HQ  N+ +    I N+ K   
Sbjct: 101 RQNSQSSLDGPQNQSRRFSLFSKSSFATSTSFLFRTSGFHQKNNKSVPKVDICNIFKKKA 160

Query: 46  YLYMSGALLN 17
           YLY+  AL N
Sbjct: 161 YLYLDEALAN 170


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,371,946
Number of Sequences: 1657284
Number of extensions: 12634608
Number of successful extensions: 31378
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31368
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)