Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0262
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -3

Query: 232 RFPSPNKQNKQAMQTPFLNFRKFNAIKKVSIKLYD*F 122
           +FP+          TP L  R    IK++ +K +D F
Sbjct: 21  QFPTDRYVGYYHFMTPTLLLRDVELIKQIGVKEFDSF 57


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 347 GLNQQYRKKVRYIYITSLLLTI 282
           G+ + +RKK+ +I+    LLTI
Sbjct: 436 GMRRNFRKKLDFIFTFITLLTI 457


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 320 VRYIYITSLLLTIVFI 273
           VRY+++TS LL   F+
Sbjct: 138 VRYVFVTSYLLFDYFV 153


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 308 KYIGPSSYIAD 340
           K++GPSS +AD
Sbjct: 255 KHVGPSSQVAD 265


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 42  YICLVHCSTLFE 7
           YIC V CST+ E
Sbjct: 648 YICHVCCSTIHE 659


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,991
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)