Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0262
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    23   2.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.6  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   4.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   6.1  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   6.1  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   6.1  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   6.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.1  

>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 164 EFTKIEKWCLH 196
           E TKI+KW LH
Sbjct: 272 ELTKIDKWFLH 282


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 564 GESFIYPESQRVTVFCKPGV 505
           G+    PES  VT  C P V
Sbjct: 298 GQMLYIPESDLVTFLCYPSV 317


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 68  WTCEHSIFNLMVISL 112
           W C  SI NL  ISL
Sbjct: 147 WMCTASILNLCAISL 161


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -3

Query: 124 FLFNK*NYHQIENRVLAS-PLIPNVAKYL 41
           +  NK + ++ EN +L + PL+ NV KYL
Sbjct: 83  YFINKNDKYE-ENTILTTMPLLINVVKYL 110


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -1

Query: 564 GESFIYPESQRVTVFCKPGV 505
           G+    PES  VT  C P V
Sbjct: 298 GQMLYIPESDLVTFLCYPSV 317


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 261 YAINNKDYGK*KRGNINISDLLPI 332
           Y  NN +Y K    NIN  + +PI
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 261 YAINNKDYGK*KRGNINISDLLPI 332
           Y  NN +Y K    NIN  + +PI
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 261 YAINNKDYGK*KRGNINISDLLPI 332
           Y  NN +Y K    NIN  + +PI
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPI 120


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 261 YAINNKDYGK*KRGNINISDLLPI 332
           Y  NN +Y K    NIN  + +PI
Sbjct: 97  YNYNNNNYNKKLYYNINYIEQIPI 120


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 99  IKLKIECSQVH*YQT 55
           +KL+I CS VH +++
Sbjct: 67  LKLRIRCSDVHHFES 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,104
Number of Sequences: 438
Number of extensions: 3777
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)