Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0261
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.78 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.78 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.4  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      22   5.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 635 CDHPQCVSRDLFCHG 591
           C + +C+ ++LFC+G
Sbjct: 116 CGNGECIDKELFCNG 130



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 635 CDHPQCVSRDLFC 597
           CD  QCV  D FC
Sbjct: 155 CDPTQCVLPDCFC 167


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -2

Query: 635 CDHPQCVSRDLFCHG 591
           C + +C+ ++LFC+G
Sbjct: 123 CGNGECIDKELFCNG 137



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 635 CDHPQCVSRDLFC 597
           CD  QCV  D FC
Sbjct: 162 CDPTQCVLPDCFC 174


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 362 IYRNWINSLVLNQNKILKLCFVVVKL 285
           I  N  NSLV+N+  I   CFV++ L
Sbjct: 76  IATNENNSLVINKRLIFIECFVMMAL 101


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 362 IYRNWINSLVLNQNKILKLCFVVVKL 285
           I  N  NSLV+N+  I   CFV++ L
Sbjct: 76  IATNENNSLVINKRLIFIECFVMMAL 101


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 635 CDHPQCVSRDLFCHG 591
           C    C+ R LFC+G
Sbjct: 124 CGDGNCIERGLFCNG 138


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +2

Query: 548 RETPWRGAHSIARMVRGKKDLW 613
           +++ WRG H +  +V   + +W
Sbjct: 14  KDSKWRGEHMVGTIVVVVRGVW 35


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 416 HTAHLMVSGYRRPWTSAMPGAEPS 487
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 649 VWMNSTSGGG 678
           VW ++TSGGG
Sbjct: 119 VWQSATSGGG 128


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 452 GDGNHSPSGGP 420
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,328
Number of Sequences: 336
Number of extensions: 3972
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)