Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0261
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.56 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.0  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   9.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.2  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   9.2  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 513 VEVLSGRQRLGSAPGIAEVHGRR*P 439
           V   +GR R G  PG AE H RR P
Sbjct: 314 VREAAGRLRTGPVPGAAERHRRRRP 338


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 84  P*CLRNNT*PTFLGQIIMYCLKSTLISFS 170
           P CL  ++ P F+  I M+ L   L SFS
Sbjct: 41  PSCLECSSVPLFINFIFMFLLHFVLFSFS 69


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 131 HNVLSEEHSHFLFSDGA 181
           +N+  EEH ++L  DG+
Sbjct: 480 NNIFPEEHRYYLIKDGS 496


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = -2

Query: 641 NH--CDHPQCVSRDLFCHGPSGLWNELPS-TVFPERYDM 534
           NH  C HP C++ D    G   L  ++P  T+   R+D+
Sbjct: 85  NHTDCYHPACITADGVERGVMSLNRKIPGPTISVCRHDL 123


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 424 PPDGEWLPSPMDFSNARG 477
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 669 GSRVHPYYLEPLRSSPVRF 613
           GSR HP Y    R+ P  F
Sbjct: 319 GSRTHPLYQPDHRAEPTSF 337


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 430 DGEWLPSPMDFSNARGRAKP 489
           DGEW P  +D    +G  KP
Sbjct: 255 DGEWEPPMIDNPEYKGEWKP 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,259
Number of Sequences: 2352
Number of extensions: 18777
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)