Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0261
         (696 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z93377-10|CAB07574.2|  321|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     28   7.3  
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    28   7.3  
U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    27   9.7  
AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical ...    27   9.7  

>U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical
           protein C04A2.1 protein.
          Length = 330

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +2

Query: 440 GYRRPWT-SAMPGAEPSRCLPLNTSTSLV*RRTCHSARETPWRGAHSIARMVRG------ 598
           G+ RPW+     G +       ++   +V RR C   +E P R +H + R VR       
Sbjct: 24  GFLRPWSPQEESGCKKQYEAWYSSYLPIVVRRRCRWEKENPRRNSHLLQRFVRKGIPHTF 83

Query: 599 KKDLWKRTGDDRS 637
           +K+LW R+   R+
Sbjct: 84  RKELWLRSCPSRA 96


>Z93377-10|CAB07574.2|  321|Caenorhabditis elegans Hypothetical
           protein F13A7.2 protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/66 (25%), Positives = 30/66 (45%)
 Frame = -2

Query: 260 FQFFYYF*WAYLWALCILLTEAIDIRKRHR*KGNESALQTVHYDLTQKCGLRVVPQTLGL 81
           FQ+F+ + W  ++ +C++L   + I   +        LQTV Y L   C   ++  T+  
Sbjct: 4   FQYFFRYYWQLVYMICLMLYITMYILIYN---FTGKTLQTVKYFLYPSCTAMLIAMTMAF 60

Query: 80  TTGPAN 63
            T   N
Sbjct: 61  ATQTRN 66


>Z92804-2|CAB07253.2|  321|Caenorhabditis elegans Hypothetical
           protein K05D4.3 protein.
          Length = 321

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -2

Query: 317 ILKLCFVVVKLICFTAGSGFQFFYYF*WAYLWALCILLTEAID 189
           IL   F V+ +ICF   S   F   F +  LWA  + ++  ++
Sbjct: 77  ILHFGFYVIVIICFALNSSTLFILVFLFLILWAAHLTMSNKVN 119


>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ADGHTAHLMVSGYRRPWTSAMPGAEPS 487
           ADGHT HL++    RP T A   A P+
Sbjct: 69  ADGHTVHLVIRNQARP-TPAPAAATPT 94


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
            protein Y47D3B.7 protein.
          Length = 1113

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 167  KGNESALQTVHYDLTQKCGLRVVPQTLGLTTGPA 66
            + N++ L   HY L + C  +++   LGL  G A
Sbjct: 906  RSNKNELARQHYSLIRNCPPKILTDNLGLAVGHA 939


>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 427 PDGEWLPSPMDFSNARGRAKPLPTA*YFHKPR 522
           P  E  PSPM F     + KP P     HKP+
Sbjct: 26  PKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPK 57


>AF099925-2|AAC69505.1|  265|Caenorhabditis elegans Hypothetical
           protein K01A2.5 protein.
          Length = 265

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 592 DHPGYGMSSPPRCFPSAMTCPSSNEAC 512
           D PGYG S PP        C   +E C
Sbjct: 63  DPPGYGTSRPPERKQEVQRCMKDSEYC 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,057,014
Number of Sequences: 27780
Number of extensions: 368755
Number of successful extensions: 787
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)