Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0258
(599 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p pro... 31 1.6
AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler lo... 31 1.6
AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B ... 31 1.6
AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA... 31 1.6
AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of th... 31 1.6
AY119070-1|AAM50930.1| 157|Drosophila melanogaster LP08443p pro... 29 4.8
AE013599-3681|AAF47057.1| 157|Drosophila melanogaster CG11300-P... 29 4.8
L41867-1|AAA86427.1| 425|Drosophila melanogaster extra sex comb... 29 6.4
AY069796-1|AAL39941.1| 425|Drosophila melanogaster SD03549p pro... 29 6.4
AE014134-2101|AAF53124.1| 425|Drosophila melanogaster CG14941-P... 29 6.4
AE014297-4292|AAO41611.2| 904|Drosophila melanogaster CG33204-P... 28 8.4
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 28 8.4
>AY069769-1|AAL39914.1| 1928|Drosophila melanogaster SD01229p protein.
Length = 1928
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 440 PIGQHDAGAVGTADRGVSSTAQAVGRVGVRHAGDARRPPRPRHAQNHRET 291
P G GAVG + A G G A D+R PP RH H T
Sbjct: 1844 PNGPSGNGAVGGVGGAAGNGAAGGGGAG---AADSRSPPPQRHVHTHHHT 1890
>AF247562-1|AAF70256.1| 2302|Drosophila melanogaster Scribbler long
isoform protein.
Length = 2302
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 440 PIGQHDAGAVGTADRGVSSTAQAVGRVGVRHAGDARRPPRPRHAQNHRET 291
P G GAVG + A G G A D+R PP RH H T
Sbjct: 2218 PNGPSGNGAVGGVGGAAGNGAAGGGGAG---AADSRSPPPQRHVHTHHHT 2264
>AF242194-1|AAF76322.1| 2302|Drosophila melanogaster brakeless-B
protein.
Length = 2302
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 440 PIGQHDAGAVGTADRGVSSTAQAVGRVGVRHAGDARRPPRPRHAQNHRET 291
P G GAVG + A G G A D+R PP RH H T
Sbjct: 2218 PNGPSGNGAVGGVGGAAGNGAAGGGGAG---AADSRSPPPQRHVHTHHHT 2264
>AE013599-2653|AAF57721.1| 2280|Drosophila melanogaster CG5580-PA,
isoform A protein.
Length = 2280
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 440 PIGQHDAGAVGTADRGVSSTAQAVGRVGVRHAGDARRPPRPRHAQNHRET 291
P G GAVG + A G G A D+R PP RH H T
Sbjct: 2196 PNGPSGNGAVGGVGGAAGNGAAGGGGAG---AADSRSPPPQRHVHTHHHT 2242
>AB044403-1|BAB20792.1| 2310|Drosophila melanogaster master of thick
veins protein.
Length = 2310
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -1
Query: 440 PIGQHDAGAVGTADRGVSSTAQAVGRVGVRHAGDARRPPRPRHAQNHRET 291
P G GAVG + A G G A D+R PP RH H T
Sbjct: 2226 PNGPSGNGAVGGVGGAAGNGAAGGGGAG---AADSRSPPPQRHVHTHHHT 2272
>AY119070-1|AAM50930.1| 157|Drosophila melanogaster LP08443p
protein.
Length = 157
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/31 (58%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 337 ASPACRTPTRPTACAVDETPRS-AVPTAPAS 426
ASPA TPT PT TP S A P APAS
Sbjct: 62 ASPAAGTPTSPTPAT--GTPSSPATPDAPAS 90
>AE013599-3681|AAF47057.1| 157|Drosophila melanogaster CG11300-PA
protein.
Length = 157
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/31 (58%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 337 ASPACRTPTRPTACAVDETPRS-AVPTAPAS 426
ASPA TPT PT TP S A P APAS
Sbjct: 62 ASPAAGTPTSPTPAT--GTPSSPATPDAPAS 90
>L41867-1|AAA86427.1| 425|Drosophila melanogaster extra sex combs
protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 469 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 386
TNST +R ++PS ST R G+++ S+
Sbjct: 28 TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55
>AY069796-1|AAL39941.1| 425|Drosophila melanogaster SD03549p
protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 469 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 386
TNST +R ++PS ST R G+++ S+
Sbjct: 28 TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55
>AE014134-2101|AAF53124.1| 425|Drosophila melanogaster CG14941-PA
protein.
Length = 425
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -2
Query: 469 TNSTLNRQRTPSGSTTPVRSGQQTAVSR 386
TNST +R ++PS ST R G+++ S+
Sbjct: 28 TNSTTSRSKSPSSSTRSKRRGRRSTKSK 55
>AE014297-4292|AAO41611.2| 904|Drosophila melanogaster CG33204-PA
protein.
Length = 904
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -2
Query: 478 DQHTNSTLNRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 356
D + L++ RTP+ S G+Q+A+SRL K SD E
Sbjct: 287 DDRRDLLLDKDRTPTTSALS-SGGKQSAISRLENKYSDILE 326
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 514 TNPGRSRIPVLKDQHTNSTLNRQRTPSGSTTPVRSGQQTA-VSRLLRKP 371
T+P R K +T+ + NRQR+PS + +P R +++ S RKP
Sbjct: 2273 TSPSRKSA---KSPYTSPSRNRQRSPSPTRSPERKSKKSPYTSPARRKP 2318
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,751,172
Number of Sequences: 53049
Number of extensions: 428049
Number of successful extensions: 1671
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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