Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0257
         (632 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    43   0.005
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    40   0.050
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    40   0.050
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    40   0.050
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    40   0.050
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;...    36   1.1  
UniRef50_A2G039 Cluster: Putative uncharacterized protein; n=1; ...    33   4.3  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   5.7  
UniRef50_Q9FM37 Cluster: Dbj|BAA95718.1; n=4; Arabidopsis thalia...    33   7.5  
UniRef50_Q23RT4 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 
UniRef50_Q22P57 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 

>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 43.2 bits (97), Expect = 0.005
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +3

Query: 561 HWPSFYNVVTGKTLALP 611
           HWPSFYNVVTGKTLALP
Sbjct: 5   HWPSFYNVVTGKTLALP 21


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 39.9 bits (89), Expect = 0.050
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 563 LAVVLQRRDWENPGVTHL 616
           LAVVLQRRDWENPGVT L
Sbjct: 68  LAVVLQRRDWENPGVTQL 85


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 39.9 bits (89), Expect = 0.050
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 563 LAVVLQRRDWENPGVTHL 616
           LAVVLQRRDWENPGVT L
Sbjct: 22  LAVVLQRRDWENPGVTQL 39


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 39.9 bits (89), Expect = 0.050
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 563 LAVVLQRRDWENPGVTHL 616
           LAVVLQRRDWENPGVT L
Sbjct: 26  LAVVLQRRDWENPGVTQL 43


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 39.9 bits (89), Expect = 0.050
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 563 LAVVLQRRDWENPGVTHL 616
           LAVVLQRRDWENPGVT L
Sbjct: 8   LAVVLQRRDWENPGVTQL 25


>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 195

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +2

Query: 563 LAVVLQRRDWENPGVTH 613
           LAVVLQRRDWENP  TH
Sbjct: 179 LAVVLQRRDWENPMKTH 195


>UniRef50_A2G039 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 478

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +3

Query: 72  EGNFSKSGSIGFREPYSIPNQKKQNLFLFIILFI 173
           +GNF+ SGSI F+   S+  + K  +++ IILF+
Sbjct: 158 DGNFTISGSIDFKSSKSLDKRLKHMMYIHIILFL 191


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 18/38 (47%), Positives = 19/38 (50%)
 Frame = -3

Query: 612 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLDGRG 499
           W   GF     C        YDSL GELGTGPPL+  G
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDG 295


>UniRef50_Q9FM37 Cluster: Dbj|BAA95718.1; n=4; Arabidopsis
           thaliana|Rep: Dbj|BAA95718.1 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 327

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 257 QFFVGVTSFGAYVYLYFYTIYTFILLM 177
           QF V   S   Y+Y+Y YTIY  +LLM
Sbjct: 217 QFLVSPLSLSLYIYIYRYTIYFQLLLM 243


>UniRef50_Q23RT4 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1348

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 316  YKYKNKFNI*YSLKFANIVILFFDQTYQDKRSSLFPHFNQNYVN 447
            Y Y+N  NI   ++ AN  I F  QTY+D++      F Q + N
Sbjct: 1294 YFYQNTDNIDKQVEVANRCIQFLTQTYKDEQDCELQSFKQQFSN 1337


>UniRef50_Q22P57 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1103

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
 Frame = +3

Query: 117 YSIPNQKKQNLFLFIILFIRHKKYKSINSIEV*INVSTK*RHAYE---KLCFRQLCFEIF 287
           Y + NQKKQNL  + I  +++  YK+I++ E+  N+       YE   K+C  +L   I 
Sbjct: 82  YEMINQKKQNLLSYDIAHLKYLLYKNISAQELNSNLQIDKVFKYEEKIKICQYELTECIL 141

Query: 288 LKI 296
            K+
Sbjct: 142 QKL 144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,390,913
Number of Sequences: 1657284
Number of extensions: 10953869
Number of successful extensions: 27690
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27665
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)