Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0256
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   2.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.4  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   8.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.4  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +3

Query: 258 NTHCNKWRCLASDTCKSSWRRSRRPCPLHPSRENNPRTGMPRNRVRPEQYVC 413
           ++HC+   C    TC+   +     CP  P  E    +  P NR R     C
Sbjct: 145 DSHCDHTTCKNGGTCQDLGKTFMCRCP--PDWEGTTLSQSP-NRRRASSNPC 193


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +3

Query: 240 WSPNSINTHCNKWRCLASDTCKSSWRRS 323
           W  N  +T  N+W     +   + WR++
Sbjct: 364 WRNNQPSTSNNRWHNNNGNNSNNHWRKN 391


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 217 LISQELIRGPLTLSIRIATSGVALPQI 297
           LISQ++I   L     +  SGVA   I
Sbjct: 153 LISQDVIANVLLFIFIVVKSGVAFQTI 179


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 38  FGTSLGRPSGLTCQSSRF 91
           FG  +G P  L CQ   F
Sbjct: 66  FGCLVGTPETLRCQREGF 83


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 43  YVPWSSFWAHLSKFTIRSSA 102
           Y P+ +  AH+++FT+++ A
Sbjct: 169 YKPFVNVNAHVAQFTLKTIA 188


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +1

Query: 43  YVPWSSFWAHLSKFTIRSSA 102
           Y P+ +  AH+++FT+++ A
Sbjct: 169 YKPFINVNAHVAQFTLKTIA 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,353
Number of Sequences: 336
Number of extensions: 2124
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)