Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0255
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 158 5e-39
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 158 5e-39
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 157 6e-39
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 157 8e-39
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 156 2e-38
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 153 2e-37
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 152 2e-37
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 150 1e-36
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 140 1e-33
12_02_1282 + 27528159-27529148,27529549-27529614 81 9e-16
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 79 5e-15
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 70 2e-12
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 67 1e-11
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 60 2e-09
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 52 6e-07
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 50 2e-06
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 47 2e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 2e-05
11_03_0123 + 10318364-10318689,10320035-10320117,10320259-10320644 30 2.1
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 29 2.8
11_06_0126 - 20378611-20379719,20380081-20381239 29 3.6
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.6
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 4.8
02_02_0714 - 13222425-13223605,13224422-13224548,13225417-132254... 29 4.8
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187... 28 6.4
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 158 bits (383), Expect = 5e-39
Identities = 72/78 (92%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 297 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 356
Query: 325 SKQEYDESGPSIVHRKCF 272
SK EYDESGPSIVHRKCF
Sbjct: 357 SKGEYDESGPSIVHRKCF 374
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 255 RCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLY 293
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 158 bits (383), Expect = 5e-39
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 295 LYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
QQMWISK EYDESGP+IVHRKCF
Sbjct: 355 QQMWISKDEYDESGPAIVHRKCF 377
Score = 77.8 bits (183), Expect = 8e-15
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM++ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLY 296
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 157 bits (382), Expect = 6e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
SK EYDESGP+IVHRKCF
Sbjct: 360 SKDEYDESGPAIVHRKCF 377
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 157 bits (381), Expect = 8e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 156 bits (378), Expect = 2e-38
Identities = 71/83 (85%), Positives = 77/83 (92%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 298 LYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 357
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
QQMWISK EYDESGP+IVHRKCF
Sbjct: 358 QQMWISKAEYDESGPAIVHRKCF 380
Score = 78.6 bits (185), Expect = 5e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 261 RCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLY 299
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 153 bits (370), Expect = 2e-37
Identities = 68/78 (87%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
S+ EY+ESGP+IVHRKCF
Sbjct: 360 SRAEYEESGPAIVHRKCF 377
Score = 77.8 bits (183), Expect = 8e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLY 296
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 152 bits (369), Expect = 2e-37
Identities = 79/130 (60%), Positives = 93/130 (71%), Gaps = 3/130 (2%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLRHPRDHI*LHHEVRRGHP*---GLVRQTVLSGGTTM 482
T+ +ERF P ++G ES P H ++ + + L VLSGG+TM
Sbjct: 250 TIGSERFRCPEVLFQPSLVGMES---PGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTM 306
Query: 481 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 302
+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDES
Sbjct: 307 FPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDES 366
Query: 301 GPSIVHRKCF 272
GP IVH KCF
Sbjct: 367 GPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 150 bits (363), Expect = 1e-36
Identities = 68/83 (81%), Positives = 73/83 (87%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTF
Sbjct: 294 LYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILASLSTF 353
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
QQMWISK EYDESGP IVH KCF
Sbjct: 354 QQMWISKAEYDESGPGIVHMKCF 376
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHE TYNSIMKCDVDIRKDLY
Sbjct: 257 RCPEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLY 295
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 140 bits (339), Expect = 1e-33
Identities = 70/92 (76%), Positives = 76/92 (82%), Gaps = 14/92 (15%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ---- 338
VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNL 359
Query: 337 ----------QMWISKQEYDESGPSIVHRKCF 272
QMWISK EYDESGP+IVHRKCF
Sbjct: 360 TPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
Score = 80.2 bits (189), Expect = 1e-15
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLY 296
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
Score = 80.6 bits (190), Expect = 1e-15
Identities = 47/78 (60%), Positives = 50/78 (64%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK MWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIK--------------------------MWI 333
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 334 AKAEYDESGPSIVHRKCF 351
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 701 GPPLKKSYELPAGQVIHYGKRK 636
G ++KSYELP GQVI G +
Sbjct: 235 GSSVEKSYELPDGQVITIGAER 256
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 78.6 bits (185), Expect = 5e-15
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLRHPRDHI*LHHEVRRGHP*GLVRQTVLSGGTTMYPG 473
T+E ER+ + +LG E + V + L+ T+L GGT G
Sbjct: 267 TIEKERYIVGEALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTG 326
Query: 472 IADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEY 311
DR Q+E L+ S + ++ PPE +YS W+GG+ILA + Q ++K +Y
Sbjct: 327 FEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDY 385
Query: 310 DESGPSIVHRKCF 272
DE+GPSIVH+KCF
Sbjct: 386 DETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L + +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
+ M I+K EY+E G R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 350
L+ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL
Sbjct: 398 LLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASL 457
Query: 349 STFQQMWISKQE 314
+FQQMW SK +
Sbjct: 458 GSFQQMWFSKAD 469
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 591 MKACGIHETTYNSIMKCDVDIRKDL 517
M G+ +S+ +CDVDIRK+L
Sbjct: 374 MSVRGLPRMVIDSVNRCDVDIRKEL 398
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Frame = -1
Query: 514 RQTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTF 341
+ VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++STF
Sbjct: 399 KTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTF 458
Query: 340 QQMW-ISKQEYDE----SGPSIVH 284
+ W I K+++ + +GPS V+
Sbjct: 459 TEAWCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 389
L + VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 370 LYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQR 429
Query: 388 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 290
Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 430 YAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPPERKYS 383
L + VLSGG+TM+ R+Q +I + +++ ++A P + Y+
Sbjct: 339 LYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYA 398
Query: 382 VWIGGSILASLSTFQQMWISKQEYDESGPSI 290
W GGS+ AS F + +K+EY+E G SI
Sbjct: 399 AWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 11/68 (16%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 374
L + VLSGG+TMYPG+ R++KE+ L + ++++I PP RK+ V++
Sbjct: 323 LYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYL 382
Query: 373 GGSILASL 350
GG++LA +
Sbjct: 383 GGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/81 (25%), Positives = 40/81 (49%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L + +++GG ++ PG+ R++ I P +K++ + W G + A+ S F
Sbjct: 622 LCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKF 681
Query: 340 QQMWISKQEYDESGPSIVHRK 278
+ S +Y E G ++ HRK
Sbjct: 682 GRHTFSLADYREHGENLFHRK 702
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMK 544
RCPE FQP +G+ GI E S+ +
Sbjct: 583 RCPEILFQPGMIGIDQAGIDEMVSISLRR 611
>11_03_0123 + 10318364-10318689,10320035-10320117,10320259-10320644
Length = 264
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 455 LHTVGDSRVHGGTTGQYGLAYKSLRMSTSHFMMELYVVSWMPQAFIPKNEGWKKA 619
LHT+ +SR G +A S+S +++Y SW P P GW +A
Sbjct: 185 LHTIEESRAGGTYRETRNMASNEREGSSSSTPVQMYEASWEPTGDAP---GWTQA 236
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -1
Query: 556 LHHEVRRGHP*GLVRQTVLSGGTT--MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 383
++ E+ HP ++R+ + +T MYP D +K+ L K APPER+++
Sbjct: 325 IYREILEYHP-KMLREFLEGTESTGFMYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 368 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGG 490
++DP G+L W+ +D + CRW G +C L V ++GG
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNLTGHVLRLHLNGG 88
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 368 STDPYGVLPLWRSNDLNLHCRW-GESC 445
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 353
MYP D +K+ L K APPER+++ S+L S
Sbjct: 255 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYS 298
>02_02_0714 -
13222425-13223605,13224422-13224548,13225417-13225461,
13225776-13225840,13226138-13226264
Length = 514
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -3
Query: 629 VAQRLSSNPRSWV*KLAASTRPHITPS*SATWTSVRTCTPNRIVRWYHHVP 477
V Q +SN W+ + A +R H+ T SV + P I HH+P
Sbjct: 166 VPQNRASNGEEWI--IRAQSRKHLPWIKKVTIKSVNSSEPEPICTSKHHIP 214
>07_03_0923 -
22617627-22617860,22618486-22618542,22618612-22618768,
22618875-22619014,22619642-22619777,22619874-22620142,
22620272-22620492,22620648-22620707,22620859-22620915,
22621008-22621405,22621929-22622000,22622098-22622169,
22622246-22622317,22622574-22622645,22622738-22622867,
22623065-22623170
Length = 750
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 699 PPPQKVLRTSRRSGHPLWKTKDSRCPEA 616
PP VLRT + + HP +T+ R P A
Sbjct: 356 PPQSAVLRTEKVTVHPSVRTRKGRVPSA 383
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,912,812
Number of Sequences: 37544
Number of extensions: 517000
Number of successful extensions: 1446
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -