Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0255
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 173 1e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 173 1e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 173 1e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 173 1e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 173 1e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 173 1e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 173 1e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 167 9e-42
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 161 3e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 94 1e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 90 1e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 2e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.005
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.005
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.61
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.61
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.61
Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical pr... 29 2.5
U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical pr... 29 2.5
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical ... 28 5.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRK 636
L+KSYELP GQVI G +
Sbjct: 237 LEKSYELPDGQVITVGNER 255
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAL 262
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRK 636
L+KSYELP GQVI G +
Sbjct: 237 LEKSYELPDGQVITVGNER 255
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAL 262
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAL 262
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRK 636
L+KSYELP GQVI G +
Sbjct: 237 LEKSYELPDGQVITVGNER 255
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 206 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 261
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 262 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 321
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 322 SGPSIVHRKCF 332
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 193 LEKSYELPDGQVITVGNERFRCPEAL 218
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 236 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 291
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 292 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 351
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 352 SGPSIVHRKCF 362
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 223 LEKSYELPDGQVITVGNERFRCPEAL 248
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 92/131 (70%), Positives = 98/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 365
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 366 SGPSIVHRKCF 376
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRKIPVAQRL 615
L+KSYELP GQVI G + + L
Sbjct: 237 LEKSYELPDGQVITVGNERFRCPEAL 262
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 167 bits (405), Expect = 9e-42
Identities = 91/131 (69%), Positives = 97/131 (74%), Gaps = 4/131 (3%)
Frame = -1
Query: 652 TMENERFPLPRGFLPTLVLGYESLR-HPRDHI*LHH---EVRRGHP*GLVRQTVLSGGTT 485
T+ NERF P LG ES H + + ++R+ L TVLSGGTT
Sbjct: 250 TVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKD----LYANTVLSGGTT 305
Query: 484 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
MYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE
Sbjct: 306 MYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 364
Query: 304 SGPSIVHRKCF 272
SGPSIVHRKCF
Sbjct: 365 SGPSIVHRKCF 375
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRK 636
L+KSYELP GQVI G +
Sbjct: 237 LEKSYELPDGQVITVGNER 255
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 161 bits (392), Expect = 3e-40
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L TVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 293 LYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 352
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
QQMWISKQEYDESGPSIVHRKCF
Sbjct: 353 QQMWISKQEYDESGPSIVHRKCF 375
Score = 77.8 bits (183), Expect = 7e-15
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYA 511
RCPE FQP+F+GM+ GIHETTY SIMKCDVDIRKDLYA
Sbjct: 256 RCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYA 295
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 692 LKKSYELPAGQVIHYGKRK 636
L+KSYELP GQVI G +
Sbjct: 236 LEKSYELPDGQVITIGNER 254
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASL 350
L ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL
Sbjct: 351 LFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSL 410
Query: 349 STFQQMWISKQEYDESGPSIVHRKC 275
TFQQMW+SK EYDESG SIV +KC
Sbjct: 411 GTFQQMWVSKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF
Sbjct: 292 LYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTF 351
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
++MW+ K+EY++ G S +H++ F
Sbjct: 352 RKMWLGKKEYEDMGASAMHKRFF 374
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYA 511
R PE F+P +G + G+ SIMKCDVD+R+ LY+
Sbjct: 255 RAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYS 294
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 70.9 bits (166), Expect = 8e-13
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 13/85 (15%)
Frame = -1
Query: 514 RQTVLSGGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGG 368
+ VLSGGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG
Sbjct: 299 KHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGG 358
Query: 367 SILASL--STFQQMWISKQEYDESG 299
++LA+L Q W+SK+EY+E G
Sbjct: 359 AVLANLMKDRDQDFWVSKKEYEEGG 383
Score = 34.3 bits (75), Expect = 0.087
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 624 PEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
PE FQP + ++ G+ E + I D+D R D Y
Sbjct: 262 PEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFY 298
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 16/94 (17%)
Frame = -1
Query: 523 GLVRQTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPER 392
GL VLSGG+TM+ A ++Q+++ L+ P + +++I+ +
Sbjct: 321 GLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQ 380
Query: 391 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 290
+Y+VW GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 381 RYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/69 (34%), Positives = 45/69 (65%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L R L+GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS STF
Sbjct: 471 LYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTF 530
Query: 340 QQMWISKQE 314
+ IS Q+
Sbjct: 531 EDSCISLQQ 539
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 627 CPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYAKPY 502
C E F+P G+ G+H+ + +I++C +D R+ LY Y
Sbjct: 435 CTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIY 476
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 350
L ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 349 STFQQMWISKQEYDESGPSIVHRKCF*T 266
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 624 PEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDL 517
PE F PS + + CG+ E SI +C +R L
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASL 350
L ++ GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L
Sbjct: 308 LAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--L 363
Query: 349 STFQQMWISKQEYDESGPSIVHRKCF*T 266
+ + WI+++++DE G S+ F T
Sbjct: 364 TASKVPWINRKDWDERGDSLEFSNFFQT 391
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 624 PEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDL 517
PE F PS + + CG+ E SI +C +R L
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPAL 308
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z92826-6|CAM06583.1| 111|Caenorhabditis elegans Hypothetical
protein C18D11.9 protein.
Length = 111
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 539 TWTSVRTC-TPN-RIVRWYHHVPWNRRPYAKGNH 444
TWT V TP+ R RW ++ W RPY G H
Sbjct: 40 TWTKVGASQTPHIRTRRWGYYGGWGYRPYGWGYH 73
>U53344-4|AAA96225.2| 575|Caenorhabditis elegans Hypothetical
protein T07H6.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 545 SATWTSVRTCTPNRIVRWYHHVPWNRRPYAKGNHSS 438
++TW+ V C+P W VP R ++K +H S
Sbjct: 364 NSTWSHVPVCSPLSCHNWPPRVPHARILFSKSSHGS 399
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK----YSVWIGGSILAS 353
+L+GG + PG+ R+++EI + + KI +I E K + W+G S+L S
Sbjct: 214 LLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGS 273
Query: 352 L-STFQQMWISKQEY 311
L T ++ ++ +E+
Sbjct: 274 LRETIERKSLTLEEW 288
>AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical
protein Y41D4A.4 protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/56 (23%), Positives = 32/56 (57%)
Frame = +3
Query: 402 GAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVWRTSPYGCPRRTS*WSYMWS 569
G M+L+ I+ ++++ C+ + + Y ++ ++ WR + + C T+ + YM+S
Sbjct: 473 GFMLLVTII---LSIVTVCV-TIVCSYFLLNAEDYRWRWTSFACGASTAFYVYMYS 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,373,436
Number of Sequences: 27780
Number of extensions: 390643
Number of successful extensions: 1071
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -