Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0255
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 157 7e-39
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 157 7e-39
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 157 7e-39
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 157 7e-39
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 152 2e-37
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 152 2e-37
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 152 3e-37
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 152 3e-37
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 140 1e-33
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 133 1e-31
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 120 7e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 111 6e-25
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 88 5e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 79 3e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 66 2e-11
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 60 1e-09
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 5e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 0.001
At5g43500.2 68418.m05318 expressed protein 31 0.57
At5g43500.1 68418.m05319 expressed protein 31 0.57
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 31 0.57
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.3
At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate 1-p... 30 1.3
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.7
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 2.3
At3g04650.1 68416.m00498 expressed protein 29 2.3
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 29 2.3
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 4.0
At2g39440.1 68415.m04841 expressed protein 29 4.0
At3g15030.2 68416.m01902 TCP family transcription factor, putati... 28 5.3
At3g15030.1 68416.m01901 TCP family transcription factor, putati... 28 5.3
At2g42760.1 68415.m05295 expressed protein 28 5.3
At5g26030.1 68418.m03097 ferrochelatase I identical to Swiss-Pro... 28 7.0
At3g61690.1 68416.m06913 expressed protein 28 7.0
At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /... 27 9.3
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (381), Expect = 7e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
SK EYDESGPSIVHRKCF
Sbjct: 360 SKSEYDESGPSIVHRKCF 377
Score = 77.8 bits (183), Expect = 7e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLY 296
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 157 bits (381), Expect = 7e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE +QPS +GM+ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLY 296
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 157 bits (381), Expect = 7e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 157 bits (381), Expect = 7e-39
Identities = 71/78 (91%), Positives = 76/78 (97%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 75.4 bits (177), Expect = 4e-14
Identities = 31/39 (79%), Positives = 34/39 (87%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE +QPS +GM+ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLY 296
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
SK EYDE+GP IVHRKCF
Sbjct: 360 SKAEYDEAGPGIVHRKCF 377
Score = 81.0 bits (191), Expect = 7e-16
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
SK EYDE+GP IVHRKCF
Sbjct: 360 SKAEYDEAGPGIVHRKCF 377
Score = 81.0 bits (191), Expect = 7e-16
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (368), Expect = 3e-37
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLY 296
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (368), Expect = 3e-37
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDESGPSIVHRKCF
Sbjct: 360 AKAEYDESGPSIVHRKCF 377
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/39 (82%), Positives = 34/39 (87%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLY 296
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 140 bits (338), Expect = 1e-33
Identities = 62/78 (79%), Positives = 70/78 (89%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI
Sbjct: 301 VLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWI 360
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EYDE G +IVHRKCF
Sbjct: 361 TKAEYDEQGGAIVHRKCF 378
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQ S +GM+ GIHETTYNSIMKCDVDIRKDLY
Sbjct: 259 RCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLY 297
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 133 bits (321), Expect = 1e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI
Sbjct: 252 VLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWI 311
Query: 325 SKQEYDESGPSIVHRKCF 272
+K EY+E+GP+IVH KCF
Sbjct: 312 TKAEYEENGPAIVHTKCF 329
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPS +GM+ GIHE TYNSIMKCD DIRKDLY
Sbjct: 210 RCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLY 248
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 120 bits (290), Expect = 7e-28
Identities = 64/134 (47%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = -1
Query: 670 PPVRSSTMENERFPLPRGFLPTLVLGYES--LRHPRDHI*LHHEVRRGHP*GLVRQTVLS 497
P + T+E ERF P V+G ES + + L V + +++
Sbjct: 234 PDGQEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRD--MYGNILMT 291
Query: 496 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K
Sbjct: 292 GGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKD 351
Query: 316 EYDESGPSIVHRKC 275
EY+E G +IVHRKC
Sbjct: 352 EYEEHGAAIVHRKC 365
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2
Query: 627 CPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
CPE FQPS +G ++ GIHE T NSI+KC VD R+D+Y
Sbjct: 248 CPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMY 285
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 111 bits (266), Expect = 6e-25
Identities = 52/62 (83%), Positives = 58/62 (93%)
Frame = -1
Query: 505 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 326
VLSGGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKI 359
Query: 325 SK 320
+
Sbjct: 360 DQ 361
Score = 81.0 bits (191), Expect = 7e-16
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
RCPE FQPSF+GM+A GIHETTYNSIMKCDVDIRKDLY
Sbjct: 258 RCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLY 296
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 88.2 bits (209), Expect = 5e-18
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASL 350
L +L+GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL
Sbjct: 356 LYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASL 415
Query: 349 STFQQMWISKQEYDESGPSIVHRKC 275
+FQQMW SK EY+E G S + RKC
Sbjct: 416 GSFQQMWFSKSEYEEHGASYIQRKC 440
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 579 GIHETTYNSIMKCDVDIRKDLYA 511
G+ SI KCDVDIR++LY+
Sbjct: 336 GLPHMVMESINKCDVDIRRELYS 358
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSIL 359
L+ TVL GGTT G R QKE L S ++ ++ PPE YS W+GG+IL
Sbjct: 276 LLENTVLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAIL 334
Query: 358 ASLSTFQQMWISKQEYDESGPSIVHRKCF 272
A + Q ++K +YDE+GPS+VHRKCF
Sbjct: 335 AKVVFPQNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/83 (34%), Positives = 49/83 (59%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L + +L+GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F
Sbjct: 338 LYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDF 397
Query: 340 QQMWISKQEYDESGPSIVHRKCF 272
+ M ++K EY+E G + R+ F
Sbjct: 398 ESMCVTKAEYEELGSARCRRRFF 420
Score = 30.7 bits (66), Expect = 1.00
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 624 PEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
PE FQP+ LGM G+ E +I C ++ LY
Sbjct: 303 PETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLY 339
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/92 (34%), Positives = 57/92 (61%), Gaps = 12/92 (13%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWI 374
L + VLSGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++
Sbjct: 294 LYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYL 353
Query: 373 GGSILAS-LSTFQQMWISKQEYDESGPSIVHR 281
GG++LA + + WI++++Y E G + +++
Sbjct: 354 GGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 642 TKDSRCPEAFFQPSFLGMKACGIHETTYNSIMKCDVDIRKDLY 514
T+ + PEA F P + ++ G+ + + I + D+D R LY
Sbjct: 253 TERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLY 295
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 16/93 (17%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIAPPERK 389
L + VLSGG+TM+ R+Q+++ + + + ++ +++ P ++
Sbjct: 324 LYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQR 383
Query: 388 YSVWIGGSILASLSTFQQMWISKQEYDESGPSI 290
++VW GGS+L+S F +K+EY+E G SI
Sbjct: 384 FAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/71 (29%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Frame = -1
Query: 514 RQTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTF 341
+ VL+GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS F
Sbjct: 393 KTVVLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIF 452
Query: 340 QQMW-ISKQEY 311
W I+++++
Sbjct: 453 PGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = -1
Query: 520 LVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 341
L +++GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 637 LTSSILMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNF 696
Query: 340 QQMWISKQEYDESG 299
+K +YDE G
Sbjct: 697 LGNAFTKMDYDEKG 710
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 630 RCPEAFFQPSFLGMKACGIHETTYNSIMKCDVD 532
RCPE F P+ +G+ G+ E SI + D
Sbjct: 597 RCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 502 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 335
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 488 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 547
Query: 334 MWISKQEYDESG 299
WI + ++ +G
Sbjct: 548 AWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = -1
Query: 502 LSGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQ 335
L GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 500 LIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGRE 559
Query: 334 MWISKQEYDESG 299
WI + ++ +G
Sbjct: 560 AWIERHQWMVNG 571
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 499
P GV+PL NDL+ WG S F + +H T G
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLHRATLG 232
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 374 DPYGVLPLWRSNDLNLHCRW-GESCD 448
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate
1-phosphotransferase-related / pyrophosphate-dependent
6-phosphofructose-1-kinase-related similar to
pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit SP:Q41140 from [Ricinus communis]
Length = 614
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 431 WGESCDFLLHTVGDSRVHGGTTGQYGLAYKSLRMSTSHFMME 556
W + + L ++G +H G AY LR + F+ME
Sbjct: 493 WSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLME 534
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 368 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 475
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -1
Query: 556 LHHEVRRGHP*GLVRQTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 383
++ E+ HP L G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At3g04650.1 68416.m00498 expressed protein
Length = 486
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 502 IRFGVQVLTDVHVALHDGVICGLVDAASFHTQERGLEESLWATGI 636
+ F +V D HVA+ G + GLV + + + RG++ +++ TGI
Sbjct: 83 VTFTARVSDDPHVAIIGGGMAGLV--CALNLEARGVQSTVFDTGI 125
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTG 499
P GV+PL NDL+ WG S F + +H + G
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLHRASMG 229
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 413 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 303
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 323 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 448
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At3g15030.2 68416.m01902 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 700 APPSKSLTNFPPV--RSSTMENERFPLPRGFLPTLVLGYESLRH 575
APP+ S T+F PV +S + ++R PL + P + ++ H
Sbjct: 309 APPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHH 352
>At3g15030.1 68416.m01901 TCP family transcription factor, putative
similar to TCP3 GB:AAC24010 [Arabidopsis thaliana]
Length = 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 700 APPSKSLTNFPPV--RSSTMENERFPLPRGFLPTLVLGYESLRH 575
APP+ S T+F PV +S + ++R PL + P + ++ H
Sbjct: 309 APPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIRAWFDPHHH 352
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 452 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 300
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At5g26030.1 68418.m03097 ferrochelatase I identical to
Swiss-Prot:P42043 ferrochelatase I,
chloroplast/mitochondrial precursor (EC 4.99.1.1)
(Protoheme ferro-lyase) (Heme synthetase) [Arabidopsis
thaliana]
Length = 466
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -2
Query: 675 TSRRSG-HPLWKTKDSRCPEAFFQPSFLGMKACGIHETTYNSIM 547
T+ SG +PL K KD R P + Q + L + C I E ++ M
Sbjct: 4 TALSSGFNPLTKRKDHRFPRSCSQRNSLSLIQCDIKERSFGESM 47
>At3g61690.1 68416.m06913 expressed protein
Length = 1303
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -3
Query: 707 GPGPPLKKSYELPAGQVIHYGKRKIPVA--QRLSSNP 603
GPG PL +Y Q++ YG R +PVA Q +S+ P
Sbjct: 1052 GPGRPL--AYTNAVNQLMTYGPRLVPVAPVQPVSTRP 1086
>At4g32375.1 68417.m04610 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:4325090;
contains Pfam profile PF00295: Polygalacturonase
(pectinase)
Length = 486
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 531 IRKDLYAKPYCPVVPPCTLESPTVCK 454
I+ D Y +P PV PP +E PT K
Sbjct: 355 IKCDYYEEPLVPVEPPQQVEPPTPTK 380
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,589,126
Number of Sequences: 28952
Number of extensions: 375909
Number of successful extensions: 1152
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -