Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0254
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     50   9e-08
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.7  

>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 49.6 bits (113), Expect = 9e-08
 Identities = 25/67 (37%), Positives = 41/67 (61%)
 Frame = -1

Query: 454 DKINLSSDYSLWSDHHKLVQRNWLYNAAFKYLTMVAGSVPSERLFTKIAQVLTQQRSRLQ 275
           + I+L +D  LW   H+++  + LY  A   L +   SVP ERLF+K  Q+ +++RSRL 
Sbjct: 531 ENIDLENDPLLWWKEHQVLYPS-LYTLAMSTLCIPGTSVPCERLFSKAGQIYSEKRSRLA 589

Query: 274 AKRVNKI 254
            K++ +I
Sbjct: 590 PKKLQEI 596


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = -1

Query: 487 CTTTESVLHNSDKINLSSDYSLWSD--HHKLVQRNWLYNAAFKYLTMVAGSVPSERLF 320
           C+T+++++  + K    +D  L S+   H     NW  +++ +   + AGS P +R++
Sbjct: 12  CSTSQNLMLQAAK-EQHADVILVSELYRHPPNNGNWAVDSSGRVAVVAAGSRPIQRMW 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,550
Number of Sequences: 2352
Number of extensions: 13826
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)