Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0253
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   3.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   3.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.1  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 159 NNDSVLPPLERSVNSI 112
           N DS LPPLE S+ ++
Sbjct: 362 NGDSRLPPLEISLKTL 377


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 159 NNDSVLPPLERSVNSI 112
           N DS LPPLE S+ ++
Sbjct: 362 NGDSRLPPLEISLKTL 377


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 123 VNSILPLMCVQPRNCS 76
           VN+ + L CV+  NCS
Sbjct: 307 VNTWISLFCVKVTNCS 322


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 35  RECLGGKIDSVA 70
           + C+GGK+D  A
Sbjct: 259 KNCVGGKVDETA 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,169
Number of Sequences: 336
Number of extensions: 2432
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)