Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0252
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   3.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   3.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   3.4  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   7.8  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 332 CVHRQCVTKDLFCH 373
           C + +C+ K+LFC+
Sbjct: 116 CGNGECIDKELFCN 129


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 332 CVHRQCVTKDLFCH 373
           C + +C+ K+LFC+
Sbjct: 123 CGNGECIDKELFCN 136


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 186 GGTSVLSVFYTAWSLGNA 239
           G T+ L  F+T W+  NA
Sbjct: 318 GKTTQLDYFFTFWAFSNA 335


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 186 GGTSVLSVFYTAWSLGNA 239
           G T+ L  F+T W+  NA
Sbjct: 318 GKTTQLDYFFTFWAFSNA 335


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 56  PREVGPAPYKAQVF 15
           PR+  P+PY  Q+F
Sbjct: 393 PRDKAPSPYGGQMF 406


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 269 DEGIIRIIPQSIPQGPCGIK 210
           D+  I +I Q +P+ P G+K
Sbjct: 884 DDTSINMIVQEVPEVPYGLK 903


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +2

Query: 404 PRSFPSAMTCASSNQACGEYFMVGKRLGSAPGIADSMNDGDHLPSGG 544
           PRS     T   +    GE  M+    G  PG+A      ++  SGG
Sbjct: 47  PRSIHGGTTVTITATQTGESEMMVVTSGVIPGVAVDFLGENNDDSGG 93


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 123 NGLFGWSIVLL 155
           N +FGWS++ L
Sbjct: 171 NKIFGWSLIFL 181


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +3

Query: 123 NGLFGWSIVLL 155
           N +FGW+++L+
Sbjct: 221 NDIFGWTLILI 231


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 331 LRSSTVRYQRSFLPRTIRLWNELPST 408
           L    VR+ +     T++LW++L ST
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWSQLFST 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,146
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)