Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0251
(639 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 206 1e-53
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 204 3e-53
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 203 9e-53
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 203 9e-53
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 200 8e-52
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 200 8e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 197 6e-51
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 197 6e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 189 2e-48
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 174 4e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 158 3e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 153 7e-38
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 107 6e-24
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 77 1e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 72 3e-13
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 66 2e-11
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 48 5e-06
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 9e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g43500.2 68418.m05318 expressed protein 40 0.001
At5g43500.1 68418.m05319 expressed protein 40 0.001
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 32 0.28
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 32 0.37
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 30 1.5
At2g39440.1 68415.m04841 expressed protein 30 1.5
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 3.4
At5g59710.1 68418.m07485 transcription regulator NOT2/NOT3/NOT5 ... 28 4.5
At2g42760.1 68415.m05295 expressed protein 28 4.5
At2g07240.1 68415.m00831 Ulp1 protease family protein contains P... 28 4.5
At1g28440.1 68414.m03496 leucine-rich repeat transmembrane prote... 28 4.5
At3g07180.2 68416.m00856 GPI transamidase component PIG-S-relate... 28 6.0
At3g07180.1 68416.m00855 GPI transamidase component PIG-S-relate... 28 6.0
At2g36430.1 68415.m04472 expressed protein contains Pfam profile... 27 7.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 206 bits (503), Expect = 1e-53
Identities = 98/124 (79%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
Frame = -2
Query: 635 QKIRLPKG-FLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIAD 459
++ R P+ F P+LV G EA GIHETTYNSIMKCDV+IRKDLY GGTTM+PGIAD
Sbjct: 255 ERFRCPEVLFQPSLV-GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIAD 313
Query: 458 RMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH 279
RM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVH
Sbjct: 314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 373
Query: 278 RKCF 267
RKCF
Sbjct: 374 RKCF 377
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 204 bits (499), Expect = 3e-53
Identities = 94/123 (76%), Positives = 104/123 (84%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G EA GIHETTYNSIMKCDV+IRKDLY GG+TM+PGIADR
Sbjct: 255 ERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 203 bits (495), Expect = 9e-53
Identities = 93/123 (75%), Positives = 103/123 (83%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G E GIHETTYNSIMKCDV+IRKDLY GGTTM+PGIADR
Sbjct: 255 ERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 203 bits (495), Expect = 9e-53
Identities = 93/123 (75%), Positives = 103/123 (83%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G E GIHETTYNSIMKCDV+IRKDLY GGTTM+PGIADR
Sbjct: 255 ERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 200 bits (487), Expect = 8e-52
Identities = 92/123 (74%), Positives = 101/123 (82%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ G EA GIHETTYNSIMKCDV+IRKDLY GGTTM+ GIADR
Sbjct: 255 ERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 200 bits (487), Expect = 8e-52
Identities = 92/123 (74%), Positives = 101/123 (82%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ G EA GIHETTYNSIMKCDV+IRKDLY GGTTM+ GIADR
Sbjct: 255 ERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDEAGPGIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 6e-51
Identities = 91/123 (73%), Positives = 101/123 (82%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G E GIHETTYNSIMKCDV+IRKDLY GGTTM+ GI DR
Sbjct: 255 ERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 197 bits (480), Expect = 6e-51
Identities = 91/123 (73%), Positives = 101/123 (82%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G E GIHETTYNSIMKCDV+IRKDLY GGTTM+ GI DR
Sbjct: 255 ERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFGGIGDR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
Query: 275 KCF 267
KCF
Sbjct: 375 KCF 377
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 189 bits (460), Expect = 2e-48
Identities = 85/123 (69%), Positives = 98/123 (79%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ T + G E GIHETTYNSIMKCDV+IRKDLY GGTTM+PGIADR
Sbjct: 256 ERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 315
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K EYDE G +IVHR
Sbjct: 316 MNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKAEYDEQGGAIVHR 375
Query: 275 KCF 267
KCF
Sbjct: 376 KCF 378
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 174 bits (424), Expect = 4e-44
Identities = 79/123 (64%), Positives = 95/123 (77%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ + G E GIHE TYNSIMKCD +IRKDLY GGTTM+ GI +R
Sbjct: 207 ERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGNIVLSGGTTMFRGIEER 266
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI+K EY+E+GP+IVH
Sbjct: 267 MTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKAEYEENGPAIVHT 326
Query: 275 KCF 267
KCF
Sbjct: 327 KCF 329
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 158 bits (384), Expect = 3e-39
Identities = 75/107 (70%), Positives = 85/107 (79%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ R P+ G EA GIHETTYNSIMKCDV+IRKDLY GGTTM+ GIADR
Sbjct: 255 ERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFSGIADR 314
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 315
M KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 153 bits (372), Expect = 7e-38
Identities = 69/122 (56%), Positives = 87/122 (71%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ P+ V G E+ GIHE T NSI+KC V+ R+D+Y GGTTM GI +R
Sbjct: 244 ERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGNILMTGGTTMLHGIKER 303
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
M KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+K EY+E G +IVHR
Sbjct: 304 MTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKDEYEEHGAAIVHR 363
Query: 275 KC 270
KC
Sbjct: 364 KC 365
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 107 bits (257), Expect = 6e-24
Identities = 48/105 (45%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Frame = -2
Query: 575 GIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 396
G+ SI KCDV+IR++LY++ GGT+ + +R++K++ +P + ++K++A
Sbjct: 336 GLPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLAS 395
Query: 395 ---PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 270
ER++SVWIGGSILASL +FQQMW SK EY+E G S + RKC
Sbjct: 396 GNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 76.6 bits (180), Expect = 1e-14
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Frame = -2
Query: 611 FLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADRMQKEITAL 432
F P+++ G E GI E I + L GGTT G R QKE L
Sbjct: 245 FQPSIL-GLEEHGIVEQLVRIISTVSSENHRQLLENTVLCGGTTSMTGFESRFQKEAN-L 302
Query: 431 APSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 270
S ++ ++ PPE YS W+GG+ILA + Q ++K +YDE+GPS+VHRKC
Sbjct: 303 CSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKC 362
Query: 269 F 267
F
Sbjct: 363 F 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 72.1 bits (169), Expect = 3e-13
Identities = 35/123 (28%), Positives = 61/123 (49%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ +P+ G G+ E +I C ++ LY + GG+T++P + +R
Sbjct: 298 ERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKER 357
Query: 455 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 276
++ E+ L P +KI + VW GGS+LAS F+ M ++K EY+E G + R
Sbjct: 358 LEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRR 417
Query: 275 KCF 267
+ F
Sbjct: 418 RFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADR 456
++ + P+ + E G+ + + I + D++ R LY GG+TMYPG+ R
Sbjct: 254 ERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSR 313
Query: 455 MQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQ 312
++KEI T L + ++++I PP RK+ V++GG++LA + + WI+++
Sbjct: 314 LEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINRE 373
Query: 311 EYDESGPSIVHR 276
+Y E G + +++
Sbjct: 374 DYMEEGINCLNK 385
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Frame = -2
Query: 548 IMKCDVNIRKDLYATPYCPGGTTMYPGIADRMQKEITALAPSTM---------------- 417
I ++ R+ LY GG+TM+ R+Q+++ + + +
Sbjct: 313 IQSAPIDTRRALYKNIVLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPV 372
Query: 416 KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 285
++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 373 EVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.2 bits (107), Expect = 9e-06
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Frame = -2
Query: 611 FLPTLVFGYEACGIHETTYNSIMKCDV-NIRKD--LYATPYCPGGTTMYPGIADRMQKEI 441
F P L G A +H+ + CD + D + T GG+ PG+++R+++E+
Sbjct: 357 FQPRLA-GMRAMSLHQAVSLCMDHCDAAGLTGDDSWFKTVVLTGGSACLPGLSERLEREL 415
Query: 440 TALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEY 306
PS++ I++I PP + W G ++++LS F W I+++++
Sbjct: 416 QDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCITRKQF 463
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
Frame = -2
Query: 635 QKIRLPKGFLPTLVFGYEACGIHETTYNSIMKC---DVNIRKDLYATPYCPGGTTMYPGI 465
++ R P+ + G + G+ E SI + + + + L ++ GG ++ PG+
Sbjct: 594 ERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHDEKELEERLTSSILMTGGCSLLPGM 653
Query: 464 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 294
+R++ I + P I ++ + W G S A+ F +K +YDE G
Sbjct: 654 NERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = -2
Query: 611 FLPTLVFGYEACGIHETTYNSIMKCD-VNIRKDLYATPYCPGGTTMYPGIADRMQKEITA 435
F P+ E G+ E +SI+ +++R+ L+++ GG + G+ +++ +
Sbjct: 449 FSPSKPKKEEKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLH 508
Query: 434 LAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 294
P T I + + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 509 AIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Frame = -2
Query: 611 FLPTLVFGYEACGIHETTYNSIMKCD-VNIRKDLYATPYCPGGTTMYPGIADRMQKEITA 435
F P+ E G+ E +SI+ +++R+ L+++ GG + G+ +++ +
Sbjct: 461 FSPSKPKKEEKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLH 520
Query: 434 LAPSTMKIKII----APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 294
P T I + + E ++ W GG+IL L ++ WI + ++ +G
Sbjct: 521 AIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAWIERHQWMVNG 571
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 32.3 bits (70), Expect = 0.28
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 369 DPYGVLSLWRSNDLNLHCRW-GESCD 443
DP GVLS W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 363 STDPYGVLSLWRSNDLNLHCRW-GESCDFLLHTVGDS 470
S DP GVLS W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -2
Query: 572 IHETTYNSIMKCDVNIRKDLYATPYCPGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 393
I E Y I++ + KD + G + +YP ++K+ L ++ K + PP
Sbjct: 336 IRELIYREILEYHPQLLKDYMNSE---GSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPP 392
Query: 392 ERKYS 378
+RK++
Sbjct: 393 DRKHA 397
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 318 RDP-HLLEGREGGEDRSTDPYGVLSLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGTTR 494
R+P G E GEDR DP + + R NDL + + + D S+VH
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAADENSIVDLSSQVH----- 93
Query: 495 TIRCCVQVLTDVHVA 539
+ CC++ V V+
Sbjct: 94 QLPCCIRFDGPVEVS 108
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 408 DHCSSREKVLRMDRWIDPRLPLYLPTDVDLETGVRRV 298
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At5g59710.1 68418.m07485 transcription regulator NOT2/NOT3/NOT5
family protein contains Pfam domain PF04153: NOT2 / NOT3
/ NOT5 family
Length = 556
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 194 INGDYKPELSSRPRAAGGSDG 256
IN D+ P+L+SRP +AGG+ G
Sbjct: 211 INNDF-PQLTSRPGSAGGTQG 230
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 447 GNHSSRPIDNED*DHCSSREKVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 295
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At2g07240.1 68415.m00831 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 928
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 162 VNYNNILRTIKLTEITSL--N*AAGRGLLEAATAVRLEALPVYNGGARLVVLLFRDPHLL 335
+++ ++ +IK E+ L A +GLL A V LEA+P G ++ ++ D
Sbjct: 111 LSFEMMMTSIKEREVEQLATTCVAVQGLLYALQLVVLEAVPAIQEGPQIDEVVLSD---- 166
Query: 336 EGREGGEDRSTDPYGVLSLWRSNDLNLHC 422
E D +T P L L + +++ +C
Sbjct: 167 SDAEAAADVATRPGVALKLGNAKNVDSNC 195
>At1g28440.1 68414.m03496 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GI:4105699
from [Arabidopsis thaliana]
Length = 996
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +3
Query: 369 DPYGVLSLWRSNDLNLHCRW-GESC 440
DP LS W SND + CRW G SC
Sbjct: 32 DPDSYLSSWNSNDAS-PCRWSGVSC 55
>At3g07180.2 68416.m00856 GPI transamidase component PIG-S-related
similar to GPI transamidase component PIG-S
(Phosphatidylinositol-glycan biosynthesis, class S
protein) (Swiss-Prot:Q96S52) [Homo sapiens]
Length = 454
Score = 27.9 bits (59), Expect = 6.0
Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 10/91 (10%)
Frame = +3
Query: 360 RSTDPYGVLSLWRS--NDLNLHCRWGESCDFLLHTV--------GDSRVHGGTTRTIRCC 509
RSTDP + S + N L SCDF L D+ H TT + RC
Sbjct: 90 RSTDPDNLRSQIQDGINQLTHQSSQCGSCDFSLSVTVQNREDQCSDTLAHSSTTCSYRCG 149
Query: 510 VQVLTDVHVALHDGVICGLVDAASFIPKNQG 602
V V L D V L D S +N G
Sbjct: 150 VIKRNGFSVGLDDTVDESLNDVFSGCSENSG 180
>At3g07180.1 68416.m00855 GPI transamidase component PIG-S-related
similar to GPI transamidase component PIG-S
(Phosphatidylinositol-glycan biosynthesis, class S
protein) (Swiss-Prot:Q96S52) [Homo sapiens]
Length = 599
Score = 27.9 bits (59), Expect = 6.0
Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 10/91 (10%)
Frame = +3
Query: 360 RSTDPYGVLSLWRS--NDLNLHCRWGESCDFLLHTV--------GDSRVHGGTTRTIRCC 509
RSTDP + S + N L SCDF L D+ H TT + RC
Sbjct: 90 RSTDPDNLRSQIQDGINQLTHQSSQCGSCDFSLSVTVQNREDQCSDTLAHSSTTCSYRCG 149
Query: 510 VQVLTDVHVALHDGVICGLVDAASFIPKNQG 602
V V L D V L D S +N G
Sbjct: 150 VIKRNGFSVGLDDTVDESLNDVFSGCSENSG 180
>At2g36430.1 68415.m04472 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 448
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 581 ACGIHETTYNSIMKCDVNIRKDL 513
AC +H TTY +++ C N KD+
Sbjct: 327 ACSMHFTTYATLLDCLTNTYKDV 349
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,432,423
Number of Sequences: 28952
Number of extensions: 307369
Number of successful extensions: 912
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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