Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0250
(397 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B58CF Cluster: PREDICTED: similar to zinc finge... 109 1e-23
UniRef50_Q9VEJ1 Cluster: CG5836-PA; n=10; Eumetazoa|Rep: CG5836-... 99 4e-20
UniRef50_Q9U3U1 Cluster: SF1 protein; n=3; Caenorhabditis|Rep: S... 76 3e-13
UniRef50_A7TEK8 Cluster: Putative uncharacterized protein; n=1; ... 72 4e-12
UniRef50_Q8NIW7 Cluster: Branchpoint-bridging protein; n=20; Euk... 72 4e-12
UniRef50_O74555 Cluster: Branchpoint-bridging protein; n=1; Schi... 68 6e-11
UniRef50_Q12186 Cluster: Branchpoint-bridging protein; n=2; Sacc... 67 1e-10
UniRef50_Q4P0H7 Cluster: Branchpoint-bridging protein; n=2; Basi... 67 1e-10
UniRef50_Q750X2 Cluster: Branchpoint-bridging protein; n=2; Sacc... 65 4e-10
UniRef50_Q15637 Cluster: Splicing factor 1; n=57; Euteleostomi|R... 51 9e-06
UniRef50_O88629 Cluster: Splicing factor 1 homolog; n=3; Euteleo... 50 2e-05
UniRef50_Q1RLD1 Cluster: Zinc finger protein; n=1; Ciona intesti... 49 3e-05
UniRef50_Q6C187 Cluster: Branchpoint-bridging protein; n=1; Yarr... 46 3e-04
UniRef50_Q9LU44 Cluster: Similarity to transcription or splicing... 45 5e-04
UniRef50_Q54BM5 Cluster: K homology (KH), type 1 domain containi... 45 6e-04
UniRef50_A3GHC4 Cluster: Predicted protein; n=1; Pichia stipitis... 44 8e-04
UniRef50_Q6BSP4 Cluster: Branchpoint-bridging protein; n=2; Sacc... 44 0.001
UniRef50_A7ASH1 Cluster: Transcription or splicing factor-like p... 40 0.013
UniRef50_Q00ZC5 Cluster: Splicing factor 1/branch point binding ... 39 0.031
UniRef50_Q5AED9 Cluster: Branchpoint-bridging protein; n=2; Sacc... 38 0.053
UniRef50_Q65CM6 Cluster: Star (Rna binding protein) family prote... 38 0.071
UniRef50_Q4Z4Y5 Cluster: Transcription or splicing factor-like p... 38 0.093
UniRef50_Q4N6K4 Cluster: Transcription factor, putative; n=2; Th... 37 0.12
UniRef50_Q7XLQ4 Cluster: OSJNBa0044M19.2 protein; n=2; Oryza sat... 36 0.22
UniRef50_Q0DY06 Cluster: Os02g0722700 protein; n=1; Oryza sativa... 36 0.22
UniRef50_Q2GMZ9 Cluster: Putative uncharacterized protein; n=2; ... 36 0.38
UniRef50_Q4RMF3 Cluster: Chromosome 10 SCAF15019, whole genome s... 34 0.87
UniRef50_O01367 Cluster: Protein held out wings; n=9; Eumetazoa|... 34 0.87
UniRef50_UPI00015BACA4 Cluster: putative translation factor pelo... 33 1.5
UniRef50_Q96PU8 Cluster: Protein quaking; n=72; Coelomata|Rep: P... 33 2.0
UniRef50_Q17339 Cluster: Female germline-specific tumor suppress... 33 2.0
UniRef50_Q8H2M0 Cluster: KH domain-like protein; n=14; Magnoliop... 32 3.5
UniRef50_A3AP06 Cluster: Putative uncharacterized protein; n=3; ... 32 3.5
UniRef50_O45180 Cluster: Putative uncharacterized protein; n=2; ... 32 3.5
UniRef50_UPI0000499319 Cluster: RNA-binding protein; n=2; Entamo... 32 4.6
UniRef50_UPI00006603BF Cluster: Homolog of Gallus gallus "RNA bi... 32 4.6
UniRef50_Q4THG0 Cluster: Chromosome undetermined SCAF2971, whole... 32 4.6
UniRef50_Q6MK35 Cluster: Putative transposase; n=1; Bdellovibrio... 32 4.6
UniRef50_UPI0000E4A9C5 Cluster: PREDICTED: similar to myeloid/ly... 31 6.1
UniRef50_Q99FI2 Cluster: Gag polyprotein; n=1; Simian immunodefi... 31 6.1
UniRef50_Q2IU95 Cluster: Putative uncharacterized protein precur... 31 6.1
UniRef50_Q8W574 Cluster: At1g09660/F21M12_5; n=8; Magnoliophyta|... 31 8.1
UniRef50_A7P312 Cluster: Chromosome chr1 scaffold_5, whole genom... 31 8.1
UniRef50_Q5B6J5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.1
>UniRef50_UPI00015B58CF Cluster: PREDICTED: similar to zinc finger
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to zinc finger protein - Nasonia vitripennis
Length = 669
Score = 109 bits (263), Expect = 1e-23
Identities = 58/104 (55%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCXXXXX 264
PEGQNDLRR QLRELA LNGTLRE+D RC NC A+DHKTWLCPDKPNVT+ IVC
Sbjct: 259 PEGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKTWLCPDKPNVTNNIVCSSCGG 318
Query: 265 XXXXXXXXXXXXXXXXNPIRLN---------IDEEYMSLMACAG 369
P N IDEEYMSLMA G
Sbjct: 319 AGHIARDCRSKRPGMGGPAAANSTAAGDKAKIDEEYMSLMAELG 362
>UniRef50_Q9VEJ1 Cluster: CG5836-PA; n=10; Eumetazoa|Rep: CG5836-PA
- Drosophila melanogaster (Fruit fly)
Length = 787
Score = 98.7 bits (235), Expect = 4e-20
Identities = 53/101 (52%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCXXXXX 264
PEG NDLRRMQLRELAQLNGTLRE+D RC C +TDHK+W CPDKP +T+ IVC
Sbjct: 488 PEGHNDLRRMQLRELAQLNGTLRENDIQRC-TCGSTDHKSWQCPDKPIITNTIVCTSCGG 546
Query: 265 XXXXXXXXXXXXXXXXNP------IRLNIDEEYMSLMACAG 369
P + IDEEYMSLMA G
Sbjct: 547 TGHLTKDCRNKRPGSGVPGMACEDSQAKIDEEYMSLMAELG 587
>UniRef50_Q9U3U1 Cluster: SF1 protein; n=3; Caenorhabditis|Rep: SF1
protein - Caenorhabditis briggsae
Length = 401
Score = 75.8 bits (178), Expect = 3e-13
Identities = 39/94 (41%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLREHD---AARCANCSATDHKTWLCPDKPNVTSAIVCXXXXXX 267
N+LR++QLRELA LNGT R D ARC+NC + +HK+W CPD PNVT+ I C
Sbjct: 139 NELRKLQLRELALLNGTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAF 198
Query: 268 XXXXXXXXXXXXXXXNPIRLNIDEEYMSLMACAG 369
+ + +D+EY +LMA G
Sbjct: 199 GHISKDCKNPKGMYASEV--GMDDEYSALMAELG 230
>UniRef50_A7TEK8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 494
Score = 72.1 bits (169), Expect = 4e-12
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
SPEGQNDL+R QLRELA+LNGTLRE D C NC HK + CP K S I+C
Sbjct: 228 SPEGQNDLKRGQLRELAELNGTLRE-DNRPCQNCGLEGHKKYDCPSKETYASRIIC 282
>UniRef50_Q8NIW7 Cluster: Branchpoint-bridging protein; n=20;
Eukaryota|Rep: Branchpoint-bridging protein - Neurospora
crassa
Length = 607
Score = 72.1 bits (169), Expect = 4e-12
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
PEGQN+L+R QLRELA LNGTLR+ + C NC H+ + CP+K N T+ I+C
Sbjct: 292 PEGQNELKRNQLRELAALNGTLRDDENQACQNCGQIGHRKYDCPEKQNYTANIIC 346
>UniRef50_O74555 Cluster: Branchpoint-bridging protein; n=1;
Schizosaccharomyces pombe|Rep: Branchpoint-bridging
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 587
Score = 68.1 bits (159), Expect = 6e-11
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
PEGQNDL+R QLR+LA LNGTLR+ + C NC H+ + CP++ N T IVC
Sbjct: 282 PEGQNDLKRNQLRQLATLNGTLRDDENQVCQNCGNVGHRRFDCPERINHTMNIVC 336
>UniRef50_Q12186 Cluster: Branchpoint-bridging protein; n=2;
Saccharomycetales|Rep: Branchpoint-bridging protein -
Saccharomyces cerevisiae (Baker's yeast)
Length = 476
Score = 67.3 bits (157), Expect = 1e-10
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDK--PNVTSAIVC 249
SPEGQNDL+R QLRELA+LNGTLRE D C C DHK + CP++ PN+ IVC
Sbjct: 244 SPEGQNDLKRGQLRELAELNGTLRE-DNRPCPICGLKDHKRYDCPNRKIPNI-QGIVC 299
>UniRef50_Q4P0H7 Cluster: Branchpoint-bridging protein; n=2;
Basidiomycota|Rep: Branchpoint-bridging protein -
Ustilago maydis (Smut fungus)
Length = 625
Score = 66.9 bits (156), Expect = 1e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
+PEG+ND +R QLRELA LNGTLR+ + C NC H+ + CP++ N T+ I+C
Sbjct: 340 TPEGENDHKRNQLRELAALNGTLRDDENQLCKNCGNKGHRAFECPEQRNWTAHIIC 395
>UniRef50_Q750X2 Cluster: Branchpoint-bridging protein; n=2;
Saccharomycetaceae|Rep: Branchpoint-bridging protein -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 507
Score = 65.3 bits (152), Expect = 4e-10
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
PEGQND +R QLRELA LNGTLRE D C C HK W C P+++ ++C
Sbjct: 246 PEGQNDFKRGQLRELAVLNGTLRE-DNRPCPLCGEQGHKKWECSSNPSLSMTVIC 299
>UniRef50_Q15637 Cluster: Splicing factor 1; n=57; Euteleostomi|Rep:
Splicing factor 1 - Homo sapiens (Human)
Length = 639
Score = 50.8 bits (116), Expect = 9e-06
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +1
Query: 73 GRGSPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVCX 252
G +PE QNDLR+MQLRELA+LNGTLRE D + W + ++T+ VC
Sbjct: 229 GIETPEDQNDLRKMQLRELARLNGTLREDDNRIL--------RPWQSSETRSITNTTVCT 280
Query: 253 XXXXXXXXXXXXXXXXXXXXNPI--RLNIDEEYMSLMACAG 369
+ +D+EY+SLMA G
Sbjct: 281 KCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELG 321
>UniRef50_O88629 Cluster: Splicing factor 1 homolog; n=3;
Euteleostomi|Rep: Splicing factor 1 homolog - Rattus
norvegicus (Rat)
Length = 173
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 73 GRGSPEGQNDLRRMQLRELAQLNGTLREHD 162
G +PE QNDLR+MQLRELA+LNGTLRE D
Sbjct: 118 GIETPEDQNDLRKMQLRELARLNGTLREDD 147
>UniRef50_Q1RLD1 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 501
Score = 49.2 bits (112), Expect = 3e-05
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 73 GRGSPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
G PE NDLR++QL ELA+LNGTLRE + + WL P+ N+T+ ++C
Sbjct: 320 GIEQPEEDNDLRKLQLMELAKLNGTLREDLMPK--------ERQWLKPENQNITNTMIC 370
>UniRef50_Q6C187 Cluster: Branchpoint-bridging protein; n=1;
Yarrowia lipolytica|Rep: Branchpoint-bridging protein -
Yarrowia lipolytica (Candida lipolytica)
Length = 605
Score = 46.0 bits (104), Expect = 3e-04
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLR-EHDAARCANCSATDHKTWLCPDKPNVTSAIVC 249
PEGQN+L+R QLRELA LNGTLR + + S+ D + N S+IVC
Sbjct: 275 PEGQNELKRSQLRELAALNGTLRDDENYGGAPQSSSGDEMDDRNKRRNNFMSSIVC 330
>UniRef50_Q9LU44 Cluster: Similarity to transcription or splicing
factor; n=6; Magnoliophyta|Rep: Similarity to
transcription or splicing factor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 804
Score = 45.2 bits (102), Expect = 5e-04
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNV-TSAIVC 249
N+ +R QLRELA LNGT+R+ + C C H+ + CP + N S ++C
Sbjct: 340 NEHKRQQLRELATLNGTIRDEEF--CRLCGEPGHRQYACPSRTNTFKSDVLC 389
>UniRef50_Q54BM5 Cluster: K homology (KH), type 1 domain
containing-protein; n=1; Dictyostelium discoideum
AX4|Rep: K homology (KH), type 1 domain
containing-protein - Dictyostelium discoideum AX4
Length = 501
Score = 44.8 bits (101), Expect = 6e-04
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDA-----------ARCANCSATDHKTWLCPDKPN 228
EG+N+ +R QLRELA++NGTLRE A +C C T H + CP + N
Sbjct: 270 EGKNEHKRQQLRELAEMNGTLRERPAYMGNRSWTPVDIKCVQCGETSHPSSDCPLRSN 327
>UniRef50_A3GHC4 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 392
Score = 44.4 bits (100), Expect = 8e-04
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLRE 156
SP GQNDL+R QLRELA LNGTLRE
Sbjct: 252 SPVGQNDLKRGQLRELAVLNGTLRE 276
>UniRef50_Q6BSP4 Cluster: Branchpoint-bridging protein; n=2;
Saccharomycetaceae|Rep: Branchpoint-bridging protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 518
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLRE 156
SP GQNDL+R QLRELA LNGTLRE
Sbjct: 272 SPVGQNDLKRGQLRELAILNGTLRE 296
>UniRef50_A7ASH1 Cluster: Transcription or splicing factor-like
protein, putative; n=1; Babesia bovis|Rep: Transcription
or splicing factor-like protein, putative - Babesia
bovis
Length = 488
Score = 40.3 bits (90), Expect = 0.013
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 100 DLRRMQLRELAQLNGT-LREHDAARCANCSATDHKTWLCPDKPNV 231
+ +R L +LA +NG L DA+RC+ C A H+ + CPD P +
Sbjct: 272 EFKRKGLEQLALVNGVALGISDASRCSVCGAVGHRAFECPDAPGL 316
>UniRef50_Q00ZC5 Cluster: Splicing factor 1/branch point binding
protein; n=2; Ostreococcus|Rep: Splicing factor 1/branch
point binding protein - Ostreococcus tauri
Length = 586
Score = 39.1 bits (87), Expect = 0.031
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
E +N +RMQLRELA +NGT E A C C H CP++ + S
Sbjct: 267 EEENVHKRMQLRELASINGTFVETFGA-CKFCGVQGHVQANCPEREKMES 315
>UniRef50_Q5AED9 Cluster: Branchpoint-bridging protein; n=2;
Saccharomycetales|Rep: Branchpoint-bridging protein -
Candida albicans (Yeast)
Length = 455
Score = 38.3 bits (85), Expect = 0.053
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLRE 156
SP+G N ++R QL+ELA LNGTLRE
Sbjct: 246 SPQGMNFMKRDQLKELAVLNGTLRE 270
>UniRef50_Q65CM6 Cluster: Star (Rna binding protein) family protein
2, isoform c; n=6; Bilateria|Rep: Star (Rna binding
protein) family protein 2, isoform c - Caenorhabditis
elegans
Length = 445
Score = 37.9 bits (84), Expect = 0.071
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR---EHDAARCANCSATDHK 201
+PEG++DL+R QL ELA +NGT R + A A +A H+
Sbjct: 230 APEGEDDLKRKQLMELAIINGTYRSGTDQSALAAAQLAAVKHQ 272
>UniRef50_Q4Z4Y5 Cluster: Transcription or splicing factor-like
protein, putative; n=5; Plasmodium|Rep: Transcription or
splicing factor-like protein, putative - Plasmodium
berghei
Length = 610
Score = 37.5 bits (83), Expect = 0.093
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 100 DLRRMQLRELAQLNG-TLREHDAARCANCSATDHKTWLCPDKPNV 231
+ ++ L +LA +NG L + + RCA C++T H T CP+ N+
Sbjct: 252 EFKKKGLEQLALVNGINLNQLETQRCAMCNSTTHLTHECPENMNI 296
>UniRef50_Q4N6K4 Cluster: Transcription factor, putative; n=2;
Theileria|Rep: Transcription factor, putative -
Theileria parva
Length = 484
Score = 37.1 bits (82), Expect = 0.12
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 100 DLRRMQLRELAQLNGT-LREHDAARCANCSATDHKTWLCPDKP 225
+ +R+ L +LA +NG L D ARC+ C A+ H+ + C D P
Sbjct: 262 EFKRLGLEQLALVNGVALGIVDIARCSICGASGHRAYECQDMP 304
>UniRef50_Q7XLQ4 Cluster: OSJNBa0044M19.2 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0044M19.2 protein -
Oryza sativa subsp. japonica (Rice)
Length = 650
Score = 36.3 bits (80), Expect = 0.22
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLREHDAARCANCSATDHK 201
N+ +R QLRELA LN T+R+ + C NC H+
Sbjct: 194 NEHKRQQLRELAALNATIRDDEC--CRNCGEPGHR 226
>UniRef50_Q0DY06 Cluster: Os02g0722700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os02g0722700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 247
Score = 36.3 bits (80), Expect = 0.22
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCS 186
E Q+ ++ QLRELA LNGTLRE R + S
Sbjct: 200 ESQDFFKKQQLRELAMLNGTLREEGMQRSGSAS 232
>UniRef50_Q2GMZ9 Cluster: Putative uncharacterized protein; n=2;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 776
Score = 35.5 bits (78), Expect = 0.38
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1
Query: 76 RGSPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSAT--DH 198
R SP G+++L+ + LRELA+L+ T RE + A SA+ DH
Sbjct: 606 RSSPAGEDELKALLLRELARLHTTTREDEDKLFATISASYLDH 648
>UniRef50_Q4RMF3 Cluster: Chromosome 10 SCAF15019, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF15019, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 499
Score = 34.3 bits (75), Expect = 0.87
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHD 162
EG+++L++MQL ELA LNGT R+++
Sbjct: 299 EGEDNLKKMQLMELAILNGTYRDNN 323
>UniRef50_O01367 Cluster: Protein held out wings; n=9;
Eumetazoa|Rep: Protein held out wings - Drosophila
melanogaster (Fruit fly)
Length = 405
Score = 34.3 bits (75), Expect = 0.87
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTS 237
EG+++L++ QL ELA +NGT R+ A A C + D +TS
Sbjct: 239 EGEDELKKRQLMELAIINGTYRDTTAKSVAVCDEEWRRLVAASDSRLLTS 288
>UniRef50_UPI00015BACA4 Cluster: putative translation factor pelota;
n=1; Ignicoccus hospitalis KIN4/I|Rep: putative
translation factor pelota - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 33.5 bits (73), Expect = 1.5
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -2
Query: 156 LPQRAVELRQLAELHPAEVVLTFRGSAAAEFLQPGG 49
L +RAVEL +LAE AEV++ +G+ A E L+P G
Sbjct: 299 LGERAVELVELAEKKGAEVIIVPKGTEAWERLRPFG 334
>UniRef50_Q96PU8 Cluster: Protein quaking; n=72; Coelomata|Rep:
Protein quaking - Homo sapiens (Human)
Length = 341
Score = 33.1 bits (72), Expect = 2.0
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLRE 156
EG++ L++MQL ELA LNGT R+
Sbjct: 184 EGEDSLKKMQLMELAILNGTYRD 206
>UniRef50_Q17339 Cluster: Female germline-specific tumor suppressor
gld-1; n=2; Caenorhabditis|Rep: Female germline-specific
tumor suppressor gld-1 - Caenorhabditis elegans
Length = 463
Score = 33.1 bits (72), Expect = 2.0
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 82 SPEGQNDLRRMQLRELAQLNGTLR 153
+PEG ++L+R QL ELA +NGT R
Sbjct: 305 APEGTDELKRKQLMELAIINGTYR 328
>UniRef50_Q8H2M0 Cluster: KH domain-like protein; n=14;
Magnoliophyta|Rep: KH domain-like protein - Oryza sativa
subsp. japonica (Rice)
Length = 286
Score = 32.3 bits (70), Expect = 3.5
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLRE 156
E Q+ +R QLRELA LN TLRE
Sbjct: 241 ESQDYYKRQQLRELAMLNSTLRE 263
>UniRef50_A3AP06 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 359
Score = 32.3 bits (70), Expect = 3.5
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLRE 156
E Q+ +R QLRELA LN TLRE
Sbjct: 213 ESQDFYKRQQLRELAMLNSTLRE 235
>UniRef50_O45180 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 254
Score = 32.3 bits (70), Expect = 3.5
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDH 198
P+G+++L+R QL ELA +NGT R +CS DH
Sbjct: 223 PDGRDELKRRQLVELAIMNGTYR-------PSCSRIDH 253
>UniRef50_UPI0000499319 Cluster: RNA-binding protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 309
Score = 31.9 bits (69), Expect = 4.6
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Frame = +1
Query: 97 NDLRRMQLRELAQLNGTLRE---------HDAARCANCSATDHKTWLCPDK 222
N L+ QLRELA NGT RE +C C + H T CP K
Sbjct: 231 NVLKHNQLRELALWNGTFREDRVYEVEQYESGVKCGFCGDSSHATCDCPLK 281
>UniRef50_UPI00006603BF Cluster: Homolog of Gallus gallus "RNA
binding/signal transduction protein QkI-1.; n=1;
Takifugu rubripes|Rep: Homolog of Gallus gallus "RNA
binding/signal transduction protein QkI-1. - Takifugu
rubripes
Length = 455
Score = 31.9 bits (69), Expect = 4.6
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLRE 156
EG+++L+++QL ELA LNGT R+
Sbjct: 271 EGEDNLKKVQLMELAILNGTYRD 293
>UniRef50_Q4THG0 Cluster: Chromosome undetermined SCAF2971, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF2971,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 273
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 358 PSATCTPHLYLALSGWWCPGLRARQSLPMWP 266
PS CTP S WCPG AR ++P P
Sbjct: 102 PSRLCTPVASGRASACWCPGALARPAVPDHP 132
>UniRef50_Q6MK35 Cluster: Putative transposase; n=1; Bdellovibrio
bacteriovorus|Rep: Putative transposase - Bdellovibrio
bacteriovorus
Length = 300
Score = 31.9 bits (69), Expect = 4.6
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 70 GGRGSPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKPN 228
GGRG+ GQ +L++++ + LN T A AN + KTW KP+
Sbjct: 231 GGRGAVVGQGELKKLRWDPIFSLNHTF----AMMRANINRLIRKTWCTTKKPD 279
>UniRef50_UPI0000E4A9C5 Cluster: PREDICTED: similar to
myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila) -
Strongylocentrotus purpuratus
Length = 5353
Score = 31.5 bits (68), Expect = 6.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 85 PEGQNDLRRMQLRELAQLNGTLREHDAARCANC 183
PEG +L + Q + LR++D +CANC
Sbjct: 1194 PEGDEELNVKRRSRCGQCSACLRKYDCKKCANC 1226
>UniRef50_Q99FI2 Cluster: Gag polyprotein; n=1; Simian
immunodeficiency virus|Rep: Gag polyprotein - Simian
immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz)
(Chimpanzeeimmunodeficiency virus)
Length = 482
Score = 31.5 bits (68), Expect = 6.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +1
Query: 73 GRGSPEGQNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWLCPDKP 225
G G P+ + + +++ Q + E A+C NC H +CP +P
Sbjct: 343 GVGGPDHKAKVLAEAMQQFQQERTNMIEVKTAKCFNCQGIGHLARMCPKRP 393
>UniRef50_Q2IU95 Cluster: Putative uncharacterized protein
precursor; n=1; Rhodopseudomonas palustris HaA2|Rep:
Putative uncharacterized protein precursor -
Rhodopseudomonas palustris (strain HaA2)
Length = 313
Score = 31.5 bits (68), Expect = 6.1
Identities = 16/29 (55%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = -3
Query: 92 PSG-DPRPPNSCSPGDPLVLER-PPPRSE 12
P G D R P++ +P P +LER PPPRSE
Sbjct: 234 PGGEDGREPSAAAPERPALLERSPPPRSE 262
>UniRef50_Q8W574 Cluster: At1g09660/F21M12_5; n=8;
Magnoliophyta|Rep: At1g09660/F21M12_5 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 298
Score = 31.1 bits (67), Expect = 8.1
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 88 EGQNDLRRMQLRELAQLNGTLRE 156
E + +R QL+ELA LNGTLRE
Sbjct: 249 ESMDHYKREQLKELAALNGTLRE 271
>UniRef50_A7P312 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 478
Score = 31.1 bits (67), Expect = 8.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 124 ELAQLNGTLREHDAARCANCSATDHKTWLCPDKPNVTSAI 243
+L L L DA+RC NC + +H CP KP T A+
Sbjct: 124 DLNNLERGLETLDASRCFNCGSYNHSLKECP-KPRDTVAV 162
>UniRef50_Q5B6J5 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 573
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 94 QNDLRRMQLRELAQLNGTLREHDAARCANCSATDHKTWL 210
Q++ R++LRE L TL ++ A A+CSA + WL
Sbjct: 298 QHNAARLRLREAIDLASTLGLNNPATYADCSAEEKGQWL 336
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,259,692
Number of Sequences: 1657284
Number of extensions: 3885503
Number of successful extensions: 17346
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 15858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17303
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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