Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0250
         (397 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   5.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    20   7.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    20   7.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    20   7.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   7.7  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -1

Query: 367 QRMPSATCTPHLYLALSGWW 308
           Q+  + T   HLY     WW
Sbjct: 81  QKQGAKTVIQHLYKNKQDWW 100


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 340 PHLYLALSGWWCPGLRA 290
           PH +  ++G W PG +A
Sbjct: 85  PHRWKYVNGEWVPGGKA 101


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 120 ELHPAEVVLTFRGSAAAEFLQ 58
           ELH  ++    RGSA A+ +Q
Sbjct: 13  ELHIKQISKWLRGSARAQEIQ 33


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 120 ELHPAEVVLTFRGSAAAEFLQ 58
           ELH  ++    RGSA A+ +Q
Sbjct: 13  ELHIKQISKWLRGSARAQEIQ 33


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 120 ELHPAEVVLTFRGSAAAEFLQ 58
           ELH  ++    RGSA A+ +Q
Sbjct: 13  ELHIKQISKWLRGSARAQEIQ 33


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 286 QSLPMWPAP 260
           Q LP WP+P
Sbjct: 272 QVLPQWPSP 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,673
Number of Sequences: 336
Number of extensions: 911
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)